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  5. Pir_g61824

Pir_g61824 (CTF2A)


Aliases : CTF2A

Description : not classified & original description: none


Gene families : OG0005387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g61824
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Aob_g07222 CTF2A not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10412 CTF2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010486 No alias not classified & original description: CDS=60-1301 0.04 OrthoFinder output from all 47 species
Cba_g10884 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.31G037200.1 Ceric.31G037200 not classified & original description: pacid=50575016... 0.06 OrthoFinder output from all 47 species
Ehy_g04667 CTF2A not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_24102 No alias Zeaxanthin epoxidase, chloroplastic OS=Oncidium hybrid... 0.04 OrthoFinder output from all 47 species
Lfl_g01121 CTF2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429390g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g26899 CTF2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10965 CTF2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo447003 No alias Zeaxanthin epoxidase, chloroplastic OS=Solanum lycopersicum 0.02 OrthoFinder output from all 47 species
Tin_g02582 CTF2A not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0071949 FAD binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002938 FAD-bd 75 410
No external refs found!