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  5. Pir_g63292

Pir_g63292


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g63292

Target Alias Description ECC score Gene Family Method Actions
AT1G47720 OSB1 Primosome PriB/single-strand DNA-binding 0.02 OrthoFinder output from all 47 species
AT4G32430 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G33990 EMB2758 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g005699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g068879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069246 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087178 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37527 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16840 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18741 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06720 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19283 CRR2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26507 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g63667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26992 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g27296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36669 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06388 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14000 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23786 MEF19 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g63624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02464.t1 Aspi01Gene02464 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60521.t1 Aspi01Gene60521 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g007651 No alias not classified & original description: CDS=1-3018 0.02 OrthoFinder output from all 47 species
Azfi_s0008.g011663 No alias not classified & original description: CDS=1-3036 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023505 No alias not classified & original description: CDS=32-2620 0.01 OrthoFinder output from all 47 species
Azfi_s0038.g026358 No alias not classified & original description: CDS=1-3174 0.02 OrthoFinder output from all 47 species
Azfi_s0065.g035815 No alias not classified & original description: CDS=1-2163 0.01 OrthoFinder output from all 47 species
Azfi_s0194.g057200 No alias not classified & original description: CDS=1-3033 0.03 OrthoFinder output from all 47 species
Azfi_s0221.g058730 No alias not classified & original description: CDS=1-747 0.01 OrthoFinder output from all 47 species
Azfi_s0250.g060212 CRR22 not classified & original description: CDS=1-2343 0.03 OrthoFinder output from all 47 species
Azfi_s0270.g061187 No alias not classified & original description: CDS=1-3441 0.01 OrthoFinder output from all 47 species
Azfi_s0349.g066523 EMB2758 not classified & original description: CDS=141-2294 0.01 OrthoFinder output from all 47 species
Cba_g02644 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03394 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05286 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11842 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20834 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g56780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G065200.1 Ceric.05G065200 not classified & original description: pacid=50577782... 0.03 OrthoFinder output from all 47 species
Ceric.10G015400.1 CRR22, Ceric.10G015400 not classified & original description: pacid=50611867... 0.03 OrthoFinder output from all 47 species
Ceric.21G046800.1 Ceric.21G046800 not classified & original description: pacid=50603820... 0.03 OrthoFinder output from all 47 species
Dac_g31448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08185 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28512 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13146 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26370 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01029254001 OSB4 RNA biosynthesis.organelle machineries.RNA polymerase... 0.01 OrthoFinder output from all 47 species
LOC_Os02g18810.1 LOC_Os02g18810 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os05g38190.2 LOC_Os05g38190 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
Len_g24813 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g34141 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07119 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07418 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38041 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_205762g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Msp_g28097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g24045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g43844 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g01899 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03644 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23510 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g27419 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33393 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36668 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g39379 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42313 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02495 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25064 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05882 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012739 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015410 No alias not classified & original description: CDS=1-2730 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015571 No alias not classified & original description: CDS=1-1581 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017370 No alias not classified & original description: CDS=72-2741 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018498 No alias not classified & original description: CDS=87-2291 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0172.g024419 No alias not classified & original description: CDS=1-2448 0.03 OrthoFinder output from all 47 species
Sam_g11900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28003 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50108 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51690 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo103099 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Smo181046 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc02g084830.4.1 Solyc02g084830 Pentatricopeptide repeat-containing protein At5g44230... 0.02 OrthoFinder output from all 47 species
Solyc11g040060.3.1 EMB2758, Solyc11g040060 Pentatricopeptide repeat-containing protein At4g33990... 0.02 OrthoFinder output from all 47 species
Spa_g10760 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12113 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18928 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35061 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g44238 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 180 200
IPR002885 Pentatricopeptide_repeat 108 136
IPR002885 Pentatricopeptide_repeat 685 709
IPR002885 Pentatricopeptide_repeat 484 509
IPR002885 Pentatricopeptide_repeat 408 454
IPR002885 Pentatricopeptide_repeat 510 556
IPR002885 Pentatricopeptide_repeat 206 252
IPR002885 Pentatricopeptide_repeat 308 354
IPR002885 Pentatricopeptide_repeat 611 654
No external refs found!