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  5. Pir_g63363

Pir_g63363


Description : not classified & original description: none


Gene families : OG0000563 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000563_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g63363

Target Alias Description ECC score Gene Family Method Actions
AT3G20890 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.01 OrthoFinder output from all 47 species
Adi_g061177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04993 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06086 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43393.t1 Aspi01Gene43393 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G052200.1 Ceric.02G052200 A1-class (Pepsin) protease & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.19G006800.1 Ceric.19G006800 not classified & original description: pacid=50575954... 0.04 OrthoFinder output from all 47 species
Cre07.g352650 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre17.g741850 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g09258 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g32908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g41681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g06242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12794 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g25324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07489 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0210.g025896 No alias not classified & original description: CDS=1-1560 0.03 OrthoFinder output from all 47 species
Smo413714 No alias No description available 0.01 OrthoFinder output from all 47 species
Spa_g18433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27795 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006361 transcription initiation at RNA polymerase I promoter IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140223 general transcription initiation factor activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 101 165
IPR000504 RRM_dom 223 279
No external refs found!