Pir_g63659 (NRPC2)

Aliases : NRPC2

Description : component *(NRPC2) of RNA polymerase III complex & original description: none

Gene families : OG0000511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000511_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g63659

Target	Alias	Description	ECC score	Gene Family Method
Aob_g33991	DRD2, NRPE2,...	component *(NRPE2) of RNA polymerase V complex &...	0.03	OrthoFinder output from all 47 species
Aop_g02927	EMB1989, RPB2, NRPB2	component *(NRPB2) of RNA polymerase II complex &...	0.03	OrthoFinder output from all 47 species
Ceric.05G021300.1	EMB1989, RPB2,...	component *(NRPB2) of RNA polymerase II complex &...	0.03	OrthoFinder output from all 47 species
Ceric.34G070500.1	DRD2, NRPE2,...	component *(NRPE2) of RNA polymerase V complex &...	0.04	OrthoFinder output from all 47 species
Dac_g02906	DRD2, NRPE2,...	component *(NRPE2) of RNA polymerase V complex &...	0.05	OrthoFinder output from all 47 species
Dac_g07951	NRPC2	component *(NRPC2) of RNA polymerase III complex &...	0.04	OrthoFinder output from all 47 species
Dcu_g32270	NRPC2	component *(NRPC2) of RNA polymerase III complex &...	0.03	OrthoFinder output from all 47 species
Dde_g01758	NRPC2	component *(NRPC2) of RNA polymerase III complex &...	0.03	OrthoFinder output from all 47 species
Ehy_g17296	NRPC2	component *(NRPC2) of RNA polymerase III complex &...	0.02	OrthoFinder output from all 47 species
Mp6g06170.1	NRPC2	subunit 2 of Pol III RNA polymerase	0.03	OrthoFinder output from all 47 species
Smo148107	EMB1989, RPB2, NRPB2	RNA biosynthesis.DNA-dependent RNA polymerase (Pol)...	0.03	OrthoFinder output from all 47 species
Spa_g04426	NRPC2	component *(NRPC2) of RNA polymerase III complex &...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006351	DNA-templated transcription	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
MF	GO:0034062	5'-3' RNA polymerase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097659	nucleic acid-templated transcription	None	Extended
MF	GO:0097747	RNA polymerase activity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007642	RNA_pol_Rpb2_2	199	378
IPR007645	RNA_pol_Rpb2_3	454	518
IPR007646	RNA_pol_Rpb2_4	555	615
IPR007120	DNA-dir_RNAP_su2_dom	684	1067
IPR007644	RNA_pol_bsu_protrusion	45	421
IPR007647	RNA_pol_Rpb2_5	637	674
IPR007641	RNA_pol_Rpb2_7	1069	1159

External Links

No external refs found!

Pir_g63659 (NRPC2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation