Pir_g64526 (LOP1, TRN1)

Aliases : LOP1, TRN1

Description : not classified & original description: none

Gene families : OG0000350 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g64526

Target	Alias	Description	ECC score	Gene Family Method
Ala_g24720	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g51595	LOP1, TRN1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene33306.t1	Aspi01Gene33306	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene68465.t1	LOP1, TRN1,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g07826	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g28623	LOP1, TRN1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g36703	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g28516	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g07082	LOP1, TRN1	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006073	GTP-bd	368	435

External Links

No external refs found!