Pir_g66193 (RAD23B, RAD23)


Aliases : RAD23B, RAD23

Description : ubiquitin-proteasome shuttle factor *(RAD23) & original description: none


Gene families : OG0001914 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001914_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g66193

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00218010 evm_27.TU.AmTr_v1... Uncharacterized CRM domain-containing protein At3g25440,... 0.03 OrthoFinder output from all 47 species
AT2G28480 No alias RNA-binding CRS1 / YhbY (CRM) domain protein 0.02 OrthoFinder output from all 47 species
AT3G27550 No alias RNA-binding CRS1 / YhbY (CRM) domain protein 0.02 OrthoFinder output from all 47 species
Adi_g008013 No alias splicing factor *(CFM9) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g084032 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g11882 No alias splicing factor *(CFM9) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G126500.1 Ceric.01G126500 splicing factor *(CFM9) & original description:... 0.03 OrthoFinder output from all 47 species
Lfl_g06610 No alias splicing factor *(CFM9) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10427237g0020 No alias Uncharacterized CRM domain-containing protein At3g25440,... 0.05 OrthoFinder output from all 47 species
MA_10436523g0010 No alias Uncharacterized CRM domain-containing protein At3g25440,... 0.03 OrthoFinder output from all 47 species
Zm00001e040411_P001 Zm00001e040411 Uncharacterized CRM domain-containing protein At3g25440,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR015940 UBA 169 207
IPR001890 RNA-binding_CRM 365 449
IPR000626 Ubiquitin-like_dom 3 76
No external refs found!