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  5. Tin_g00497

Tin_g00497


Description : not classified & original description: none


Gene families : OG0000091 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000091_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g00497
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00042010 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00105p00148840 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G18290 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
AT1G76600 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
AT3G50800 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
Aev_g10917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g24840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g38500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38972 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g00750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14847 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g30640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18098 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01054.t1 Aspi01Gene01054 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene36870.t1 Aspi01Gene36870 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene36874.t1 Aspi01Gene36874 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene36890.t1 Aspi01Gene36890 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36924.t1 Aspi01Gene36924 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene36975.t1 Aspi01Gene36975 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene65672.t1 Aspi01Gene65672 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene65675.t1 Aspi01Gene65675 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65680.t1 Aspi01Gene65680 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68759.t1 Aspi01Gene68759 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G027400.1 Ceric.14G027400 not classified & original description: pacid=50633616... 0.06 OrthoFinder output from all 47 species
Ceric.14G097000.1 Ceric.14G097000 not classified & original description: pacid=50633954... 0.05 OrthoFinder output from all 47 species
Ceric.14G097100.1 Ceric.14G097100 not classified & original description: pacid=50633776... 0.04 OrthoFinder output from all 47 species
Ceric.14G097200.1 Ceric.14G097200 not classified & original description: pacid=50634613... 0.08 OrthoFinder output from all 47 species
Ceric.16G033100.1 Ceric.16G033100 not classified & original description: pacid=50589567... 0.03 OrthoFinder output from all 47 species
Ceric.20G063200.1 Ceric.20G063200 not classified & original description: pacid=50566683... 0.02 OrthoFinder output from all 47 species
Ceric.26G065000.1 Ceric.26G065000 not classified & original description: pacid=50598973... 0.04 OrthoFinder output from all 47 species
Ceric.26G065100.1 Ceric.26G065100 not classified & original description: pacid=50599287... 0.04 OrthoFinder output from all 47 species
Dac_g05506 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g07675 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g07714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37617 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g15217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g46978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g19771 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03872 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g10660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14070 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g18795 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19107 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g21830 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g31299 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01013456001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_05757 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_05758 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_05765 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_05766 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_06364 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_35304 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_35305 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Gb_41646 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g49210.1 LOC_Os01g49210 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g09970.1 LOC_Os02g09970 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g09980.1 LOC_Os02g09980 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g09990.1 LOC_Os02g09990 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g19260.1 LOC_Os03g19260 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g07240.1 LOC_Os05g07240 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g47960.1 LOC_Os05g47960 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g31990.1 LOC_Os09g31990 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g12364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g41270 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10427211g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_152921g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_34792g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_76101g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_897390g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g03220.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp4g19320.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g05111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21042 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g23520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29597 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g48266 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12089 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g10125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g24927 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29703 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g33381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11528 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g15481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65920 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g18144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41073 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000026 No alias not classified & original description: CDS=1-1638 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0144.g022943 No alias not classified & original description: CDS=786-1670 0.02 OrthoFinder output from all 47 species
Sam_g12718 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g091180.1.1 Solyc02g091180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g082960.1.1 Solyc04g082960 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g06541 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18211 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g22642 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g40331 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g55602 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e013167_P001 Zm00001e013167 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e026461_P001 Zm00001e026461 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e030501_P001 Zm00001e030501 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e034558_P001 Zm00001e034558 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e038350_P001 Zm00001e038350 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025322 PADRE_dom 1 209
No external refs found!