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  5. Tin_g00580

Tin_g00580


Description : not classified & original description: none


Gene families : OG0004539 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004539_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g00580

Target Alias Description ECC score Gene Family Method Actions
Aev_g02005 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06000 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene30545.t1 Aspi01Gene30545 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G051600.1 Ceric.13G051600 not classified & original description: pacid=50635538... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000254.94 No alias No description available 0.03 OrthoFinder output from all 47 species
Cre06.g278096 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre16.g691351 No alias No description available 0.02 OrthoFinder output from all 47 species
Dde_g06539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02042 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007168001 No alias Thioredoxin-like protein AAED1, chloroplastic... 0.02 OrthoFinder output from all 47 species
GSVIVT01007444001 No alias Thioredoxin-like protein AAED1, chloroplastic... 0.06 OrthoFinder output from all 47 species
GSVIVT01007445001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os03g51950.1 LOC_Os03g51950 no description available(sp|q9zuu2|pxl2c_arath : 87.0) 0.07 OrthoFinder output from all 47 species
LOC_Os03g51960.1 LOC_Os03g51960 no description available(sp|q9zuu2|pxl2c_arath : 85.9) 0.05 OrthoFinder output from all 47 species
Msp_g00430 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g18343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28396 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g05951 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e012107_P001 Zm00001e012107 no description available(sp|q9zuu2|pxl2c_arath : 88.6) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
InterPro domains Description Start Stop
IPR032801 PXL2A/B/C 129 246
No external refs found!