1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g01520

Tin_g01520 (RAP2.4)


Aliases : RAP2.4

Description : not classified & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g01520
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00051610 TINY2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G44830 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G35700 ERF38, ATERF38 ERF family protein 38 0.02 OrthoFinder output from all 47 species
AT2G36450 HRD Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G16280 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G23220 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G57600 No alias Integrase-type DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G13620 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.03 OrthoFinder output from all 47 species
AT4G27950 CRF4 cytokinin response factor 4 0.03 OrthoFinder output from all 47 species
AT5G11190 SHN3 Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G19790 RAP2.11 related to AP2 11 0.04 OrthoFinder output from all 47 species
AT5G47220 ERF2, ATERF2, ATERF-2 ethylene responsive element binding factor 2 0.03 OrthoFinder output from all 47 species
AT5G51190 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g40001 No alias cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
Ala_g22400 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g00529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04135 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.04 OrthoFinder output from all 47 species
Als_g10580 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g45961 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aob_g22160 No alias cutin and suberin biosynthesis transcription factor... 0.04 OrthoFinder output from all 47 species
Aspi01Gene03857.t1 Aspi01Gene03857 subgroup ERF-I transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene06525.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene29034.t1 CRF3, Aspi01Gene29034 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56620.t1 RAP2.9, DEAR5,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56622.t1 RAP2.9, DEAR5,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G046500.1 Ceric.11G046500 subgroup ERF-V transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.13G053900.1 Ceric.13G053900 subgroup ERF-IX transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.13G080300.1 Ceric.13G080300 subgroup ERF-V transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.20G089300.1 PUCHI, Ceric.20G089300 subgroup ERF-VIII transcription factor & original... 0.05 OrthoFinder output from all 47 species
Dac_g26350 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g32017 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g34743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37778 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39353 TINY2 subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Dac_g40206 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11868 SHN3 cutin and suberin biosynthesis transcription factor... 0.05 OrthoFinder output from all 47 species
GSVIVT01001089001 Rap2.6L RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01008649001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01013903001 No alias Ethylene-responsive transcription factor 2 OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
GSVIVT01013924001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
GSVIVT01033793001 HRD RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01035911001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
Gb_02790 No alias transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
Gb_03783 ERF-1, ATERF-1 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Gb_11807 No alias transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Gb_11856 HRE2 Ethylene-responsive transcription factor RAP2-3... 0.05 OrthoFinder output from all 47 species
Gb_23321 ERF-1, ATERF-1 transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
Gb_26067 ATERF3, ERF3 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Gb_40290 DREB1B, ATCBF1, CBF1 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_41294 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_41433 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_41445 No alias transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
Gb_41836 ERF-1, ATERF-1 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
LOC_Os01g58420.1 ATERF4, RAP2.5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os02g10760.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.04 OrthoFinder output from all 47 species
LOC_Os02g43940.1 ERF38, ATERF38,... transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
LOC_Os02g55380.1 LOC_Os02g55380 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
LOC_Os03g08460.1 RAP2.12, LOC_Os03g08460 Ethylene-responsive transcription factor ERF073... 0.02 OrthoFinder output from all 47 species
LOC_Os03g22170.1 HRE2, LOC_Os03g22170 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os04g46240.1 ERF5, ATERF-5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os04g46250.1 ERF-6-6, ERF6,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os06g08340.1 LOC_Os06g08340 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os06g10780.1 LOC_Os06g10780 transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
LOC_Os07g12510.1 ERF110, LOC_Os07g12510 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os07g47330.1 PUCHI, LOC_Os07g47330 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os08g41030.1 LOC_Os08g41030 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g38000.1 HRD, LOC_Os10g38000 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
MA_10430769g0010 tny transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_225124g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_40048g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_4032g0010 ATERF3, ERF3 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_647924g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_6677438g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_78784g0010 ATERF3, ERF3 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_904750g0010 No alias transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
MA_9260020g0010 SHN3 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp6g08690.1 TINY2 transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
Nbi_g07909 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g24161 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g53948 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08048 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Pnu_g11378 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pp3c2_33310V3.1 ERF2, ATERF2,... ethylene responsive element binding factor 2 0.02 OrthoFinder output from all 47 species
Ppi_g11128 HRE2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g32689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006108 No alias not classified & original description: CDS=1-567 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010554 tny not classified & original description: CDS=1-1182 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013429 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021258 CRF5 subgroup ERF-VI transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023147 No alias not classified & original description: CDS=1-1539 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0228.g026387 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc01g008880.3.1 CRF5, Solyc01g008880 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc01g009440.3.1 CBF4, DREB1D,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc03g114440.1.1 RAP2.11, Solyc03g114440 transcription factor (ERF). transcription factor (ERN1) 0.04 OrthoFinder output from all 47 species
Solyc04g071770.3.1 ERF110, Solyc04g071770 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc05g050790.3.1 ATERF13, ERF13,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc05g052410.3.1 DREB2A, DREB2,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc08g066660.1.1 TINY2, Solyc08g066660 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc08g078170.1.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
Solyc12g042210.2.1 Solyc12g042210 transcription factor (ERF) 0.09 OrthoFinder output from all 47 species
Spa_g42044 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48877 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g52130 No alias subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Zm00001e001139_P001 DREB26, Zm00001e001139 Ethylene-responsive transcription factor ERF014... 0.03 OrthoFinder output from all 47 species
Zm00001e003800_P001 RRTF1, Zm00001e003800 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e007205_P001 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1E... 0.02 OrthoFinder output from all 47 species
Zm00001e009947_P001 RRTF1, Zm00001e009947 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e010195_P001 DREB1A, ATCBF3,... Dehydration-responsive element-binding protein 1A... 0.03 OrthoFinder output from all 47 species
Zm00001e013685_P001 ATERF4, RAP2.5,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e014413_P001 Zm00001e014413 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e015326_P001 Zm00001e015326 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e015327_P001 Zm00001e015327 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e015328_P001 Zm00001e015328 transcription factor (DREB) 0.06 OrthoFinder output from all 47 species
Zm00001e015430_P001 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1G... 0.02 OrthoFinder output from all 47 species
Zm00001e015968_P001 Zm00001e015968 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e021579_P001 ERF7, ATERF7,... Pathogenesis-related genes transcriptional activator... 0.02 OrthoFinder output from all 47 species
Zm00001e023157_P001 Zm00001e023157 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Zm00001e023224_P001 Zm00001e023224 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e032032_P001 ATERF12, ERF12,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e033537_P001 ERF1, ATERF1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e034242_P001 RAP2.12, Zm00001e034242 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e034741_P001 RAP2.11, Zm00001e034741 transcription factor (ERF). transcription factor (ERN1) 0.02 OrthoFinder output from all 47 species
Zm00001e036130_P001 RAP2.4, Zm00001e036130 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Zm00001e041288_P001 Zm00001e041288 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 76 123
No external refs found!