Aliases : RPN5B
Description : regulatory component *(RPN5) of 26S proteasome & original description: none
Gene families : OG0003644 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003644_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Tin_g01849 | |
| Cluster | HCCA: Cluster_141 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G09900 | EMB2107, MSA, RPN5A | 26S proteasome regulatory subunit, putative (RPN5) | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g01968 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021348.57 | RPN5B | Protein degradation.26S proteasome.regulatory... | 0.01 | OrthoFinder output from all 47 species | |
| Cre14.g632775 | RPN5B | Protein degradation.26S proteasome.regulatory... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g07527 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01022276001 | RPN5B | Protein degradation.26S proteasome.regulatory... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g63430.1 | RPN5B, LOC_Os03g63430 | regulatory component RPN5 of 26S proteasome | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g01635 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g04551 | EMB2107, MSA, RPN5A | regulatory component *(RPN5) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005047 | signal recognition particle binding | IEP | HCCA |
| MF | GO:0005048 | signal sequence binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005743 | mitochondrial inner membrane | IEP | HCCA |
| CC | GO:0005783 | endoplasmic reticulum | IEP | HCCA |
| CC | GO:0005786 | signal recognition particle, endoplasmic reticulum targeting | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006486 | protein glycosylation | IEP | HCCA |
| BP | GO:0006605 | protein targeting | IEP | HCCA |
| BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006848 | pyruvate transport | IEP | HCCA |
| BP | GO:0006850 | mitochondrial pyruvate transmembrane transport | IEP | HCCA |
| BP | GO:0006873 | cellular monoatomic ion homeostasis | IEP | HCCA |
| BP | GO:0006874 | cellular calcium ion homeostasis | IEP | HCCA |
| BP | GO:0006875 | cellular metal ion homeostasis | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0008312 | 7S RNA binding | IEP | HCCA |
| MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0015711 | organic anion transport | IEP | HCCA |
| BP | GO:0015718 | monocarboxylic acid transport | IEP | HCCA |
| BP | GO:0015849 | organic acid transport | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0019725 | cellular homeostasis | IEP | HCCA |
| CC | GO:0019866 | organelle inner membrane | IEP | HCCA |
| BP | GO:0030003 | cellular monoatomic cation homeostasis | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0030942 | endoplasmic reticulum signal peptide binding | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
| BP | GO:0032469 | endoplasmic reticulum calcium ion homeostasis | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| MF | GO:0033218 | amide binding | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0042277 | peptide binding | IEP | HCCA |
| BP | GO:0042592 | homeostatic process | IEP | HCCA |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
| MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
| BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0046942 | carboxylic acid transport | IEP | HCCA |
| CC | GO:0048500 | signal recognition particle | IEP | HCCA |
| BP | GO:0048878 | chemical homeostasis | IEP | HCCA |
| BP | GO:0050801 | monoatomic ion homeostasis | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0051668 | localization within membrane | IEP | HCCA |
| BP | GO:0055065 | metal ion homeostasis | IEP | HCCA |
| BP | GO:0055074 | calcium ion homeostasis | IEP | HCCA |
| BP | GO:0055080 | monoatomic cation homeostasis | IEP | HCCA |
| BP | GO:0055082 | cellular chemical homeostasis | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| BP | GO:0098771 | inorganic ion homeostasis | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901475 | pyruvate transmembrane transport | IEP | HCCA |
| BP | GO:1903825 | organic acid transmembrane transport | IEP | HCCA |
| BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | HCCA |
| BP | GO:1990542 | mitochondrial transmembrane transport | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| No external refs found! |
