Aliases : RH8, ATRH8
Description : DDX6-type mRNA helicase *(RH12/RH8) & original description: none
Gene families : OG0001822 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001822_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G61240 | No alias | DEA(D/H)-box RNA helicase family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g012832 | RH8, ATRH8 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g05633 | RH8, ATRH8 | DDX6-type mRNA helicase *(RH12/RH8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19787 | RH8, ATRH8 | DDX6-type mRNA helicase *(RH12/RH8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05828 | RH8, ATRH8 | DDX6-type mRNA helicase *(RH12/RH8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G064200.1 | RH8, ATRH8,... | DDX6-type mRNA helicase *(RH12/RH8) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g00876 | RH8, ATRH8 | DDX6-type mRNA helicase *(RH12/RH8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08850 | RH8, ATRH8 | DDX6-type mRNA helicase *(RH12/RH8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g12091 | RH8, ATRH8 | DDX6-type mRNA helicase *(RH12/RH8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01026866001 | RH8, ATRH8 | DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g45040.3 | RH8, ATRH8,... | DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g57206 | RH8, ATRH8 | DDX6-type mRNA helicase *(RH12/RH8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g14570.1 | RH8, ATRH8 | DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g10959 | RH8, ATRH8 | DDX6-type mRNA helicase *(RH12/RH8) & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| MF | GO:0005524 | ATP binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000439 | transcription factor TFIIH core complex | IEP | HCCA |
| MF | GO:0001671 | ATPase activator activity | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| MF | GO:0005319 | lipid transporter activity | IEP | HCCA |
| MF | GO:0005548 | phospholipid transporter activity | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006289 | nucleotide-excision repair | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006869 | lipid transport | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0007009 | plasma membrane organization | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0015748 | organophosphate ester transport | IEP | HCCA |
| BP | GO:0015914 | phospholipid transport | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| BP | GO:0017121 | plasma membrane phospholipid scrambling | IEP | HCCA |
| MF | GO:0017128 | phospholipid scramblase activity | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0034204 | lipid translocation | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0045332 | phospholipid translocation | IEP | HCCA |
| BP | GO:0045892 | negative regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0048523 | negative regulation of cellular process | IEP | HCCA |
| BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051253 | negative regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0061024 | membrane organization | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0065008 | regulation of biological quality | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
| BP | GO:0097035 | regulation of membrane lipid distribution | IEP | HCCA |
| MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140303 | intramembrane lipid transporter activity | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
| BP | GO:1902679 | negative regulation of RNA biosynthetic process | IEP | HCCA |
| BP | GO:1903507 | negative regulation of nucleic acid-templated transcription | IEP | HCCA |
| No external refs found! |
