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  5. Tin_g02085

Tin_g02085 (ATCNGC20, CNGC20, CNBT1)


Aliases : ATCNGC20, CNGC20, CNBT1

Description : cyclic nucleotide-gated cation channel *(CNGC) & original description: none


Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02085

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00268510 ATCNGC17,... Cyclic nucleotide-gated ion channel 17 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT2G46430 ATCNGC3, CNGC3, CNGC3.C cyclic nucleotide gated channel 3 0.03 OrthoFinder output from all 47 species
AT3G17700 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-binding transporter 1 0.03 OrthoFinder output from all 47 species
AT4G01010 ATCNGC13, CNGC13 cyclic nucleotide-gated channel 13 0.03 OrthoFinder output from all 47 species
Aev_g08257 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.04 OrthoFinder output from all 47 species
Ala_g12240 ATCNGC9, CNGC9 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Aop_g01828 CNGC7, ATCNGC7 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Aop_g22499 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Cba_g15401 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.04 OrthoFinder output from all 47 species
Ceric.13G070300.1 CNGC5, ATCNGC5,... cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000851.5 ATCNGC9, CNGC9 Putative cyclic nucleotide-gated ion channel 8... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001264.1 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g22042 DND2, CNGC4,... cyclic nucleotide-gated cation channel *(CNGC) &... 0.04 OrthoFinder output from all 47 species
LOC_Os02g54760.1 ATCNGC17,... cyclic nucleotide-gated cation channel (CNGC) 0.04 OrthoFinder output from all 47 species
LOC_Os06g10580.1 ATCNGC20,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
Len_g11559 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Nbi_g04360 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Ore_g19477 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Pir_g38103 DND1, ATCNGC2, CNGC2 temperature sensor protein *(CNGC2) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16467 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0191.g025297 DND1, ATCNGC2, CNGC2 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Solyc03g098210.4.1 ATCNGC20,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Solyc07g005590.3.1 CNGC5, ATCNGC5,... cyclic nucleotide-gated cation channel (CNGC) 0.05 OrthoFinder output from all 47 species
Solyc12g010010.2.1 CNGC5, ATCNGC5,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Zm00001e030701_P001 ATCNGC1, CNGC1,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 126 450
No external refs found!