Tin_g02214


Description : not classified & original description: none


Gene families : OG0000607 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000607_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02214

Target Alias Description ECC score Gene Family Method Actions
AT2G45830 DTA2 downstream target of AGL15 2 0.04 OrthoFinder output from all 47 species
Ehy_g31930 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01026872001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_34473 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g05690.1 LOC_Os05g05690 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10425862g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g46628 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g32534 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g59552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g28302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013005 No alias not classified & original description: CDS=468-1319 0.03 OrthoFinder output from all 47 species
Solyc01g094380.2.1 Solyc01g094380 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e024271_P001 Zm00001e024271 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006598 CAP10 3 108
No external refs found!