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  5. Tin_g02444

Tin_g02444


Description : not classified & original description: none


Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02444

Target Alias Description ECC score Gene Family Method Actions
Aev_g10967 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23757 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s1320.g101441 No alias E3 ubiquitin ligase & original description: CDS=1-1113 0.03 OrthoFinder output from all 47 species
Cba_g03733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68167 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G080400.1 Ceric.16G080400 not classified & original description: pacid=50588988... 0.03 OrthoFinder output from all 47 species
Cre02.g102600 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g11528 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19756 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04869 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08355 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_16779 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_20192 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g06920.2 LOC_Os02g06920 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os05g37900.1 LOC_Os05g37900 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g04526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26464 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06087 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10913 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018968 No alias bHLH-type transcription factor & original description: CDS=1-675 0.03 OrthoFinder output from all 47 species
Solyc07g044780.3.1 Solyc07g044780 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Tin_g42112 No alias E3 ubiquiTin ligase & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 83 133
No external refs found!