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  5. Tin_g02677

Tin_g02677 (TUA3)


Aliases : TUA3

Description : alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer & original description: none


Gene families : OG0000233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02677
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AT1G04820 TOR2, TUA4 tubulin alpha-4 chain 0.03 OrthoFinder output from all 47 species
AT1G50010 TUA2 tubulin alpha-2 chain 0.03 OrthoFinder output from all 47 species
AT4G14960 TUA6 Tubulin/FtsZ family protein 0.05 OrthoFinder output from all 47 species
AT5G19770 TUA3 tubulin alpha-3 0.03 OrthoFinder output from all 47 species
AT5G19780 TUA5 tubulin alpha-5 0.03 OrthoFinder output from all 47 species
Adi_g017319 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Ala_g05333 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aop_g27000 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Aop_g60213 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aop_g62084 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aop_g62975 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Aop_g70531 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Dcu_g09742 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
GSVIVT01025462001 TUA3 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
GSVIVT01037046001 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
LOC_Os07g38730.1 TUA3, LOC_Os07g38730 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Len_g18895 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Nbi_g06679 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Zm00001e038704_P001 TUA3, Zm00001e038704 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 3 213
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 263 392
No external refs found!