Tin_g02692


Description : E3 ubiquiTin ligase *(DA2) & original description: none


Gene families : OG0002364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002364_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02692

Target Alias Description ECC score Gene Family Method Actions
Ceric.18G086000.1 Ceric.18G086000 E3 ubiquitin ligase *(DA2) & original description:... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001164.15 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os02g14720.1 LOC_Os02g14720 E3 ubiquitin ligase (DA2) 0.03 OrthoFinder output from all 47 species
Msp_g11059 No alias E3 ubiquitin ligase *(DA2) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e036468_P001 Zm00001e036468 E3 ubiquitin ligase (DA2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA

No InterPro domains available for this sequence

No external refs found!