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  5. Tin_g02906

Tin_g02906


Description : component *(SF3B1) of splicing factor 3B complex & original description: none


Gene families : OG0002634 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002634_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02906

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00094580 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U2-type-intron-specific... 0.03 OrthoFinder output from all 47 species
Ala_g02669 No alias component *(SF3B1) of splicing factor 3B complex &... 0.05 OrthoFinder output from all 47 species
Aop_g71156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g08997 No alias component *(SF3B1) of splicing factor 3B complex &... 0.03 OrthoFinder output from all 47 species
Ceric.02G008400.1 Ceric.02G008400 component *(SF3B1) of splicing factor 3B complex &... 0.03 OrthoFinder output from all 47 species
Cre12.g494100 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.03 OrthoFinder output from all 47 species
Dac_g02908 No alias component *(SF3B1) of splicing factor 3B complex &... 0.04 OrthoFinder output from all 47 species
Dcu_g04130 No alias component *(SF3B1) of splicing factor 3B complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g02942 No alias component *(SF3B1) of splicing factor 3B complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01025852001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.03 OrthoFinder output from all 47 species
Gb_12533 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_14294 No alias component SF3B1 of splicing factor 3B complex 0.03 OrthoFinder output from all 47 species
LOC_Os02g04950.1 LOC_Os02g04950 component SF3B1 of splicing factor 3B complex 0.03 OrthoFinder output from all 47 species
LOC_Os02g05310.4 LOC_Os02g05310 component SF3B1 of splicing factor 3B complex 0.02 OrthoFinder output from all 47 species
Mp5g19650.1 No alias component SF3B1 of splicing factor 3B complex 0.03 OrthoFinder output from all 47 species
Nbi_g04463 No alias component *(SF3B1) of splicing factor 3B complex &... 0.03 OrthoFinder output from all 47 species
Pnu_g13320 No alias component *(SF3B1) of splicing factor 3B complex &... 0.02 OrthoFinder output from all 47 species
Pnu_g31070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g041790.1.1 Solyc07g041790 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e025224_P001 Zm00001e025224 component SF3B1 of splicing factor 3B complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
InterPro domains Description Start Stop
IPR015016 SF3b_su1 280 410
No external refs found!