Tin_g03631 (UBQ6)

Aliases : UBQ6

Description : component *(eS31) of small ribosomal-subunit (SSU) proteome & original description: none

Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g03631
Cluster	HCCA: Cluster_140

Target	Alias	Description	ECC score	Gene Family Method
AT2G47110	UBQ6	ubiquitin 6	0.02	OrthoFinder output from all 47 species
AT3G62250	UBQ5	ubiquitin 5	0.02	OrthoFinder output from all 47 species
Als_g28227	No alias	component *(eL40) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g16439	No alias	component *(eL40) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Ceric.08G035500.1	Ceric.08G035500	component *(eL40) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ceric.27G040600.1	Ceric.27G040600	component *(eL40) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ceric.31G024800.1	UBQ6, Ceric.31G024800	component *(eS31) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00022075.50	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.01	OrthoFinder output from all 47 species
Cre06.g273600	UBQ6	Protein biosynthesis.cytosolic ribosome.small subunit...	0.02	OrthoFinder output from all 47 species
GSVIVT01033876001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
Gb_15027	UBQ6	component RPS27a of SSU proteome	0.03	OrthoFinder output from all 47 species
Gb_40288	UBQ6	component RPS27a of SSU proteome	0.03	OrthoFinder output from all 47 species
Gb_41257	No alias	component RPL40 of LSU proteome component	0.04	OrthoFinder output from all 47 species
LOC_Os01g22490.1	UBQ6, LOC_Os01g22490	component RPS27a of SSU proteome	0.03	OrthoFinder output from all 47 species
Len_g14648	UBQ6	component *(eS31) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Len_g27536	UBQ14	UBQ ubiquitin-fold protein & original description: none	0.03	OrthoFinder output from all 47 species
Mp6g16040.1	No alias	Ubiquitin-40S ribosomal protein S27a OS=Hordeum vulgare...	0.02	OrthoFinder output from all 47 species
Mp7g12490.1	No alias	component RPL40 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Mp7g12760.1	UBQ6	component RPS27a of SSU proteome	0.02	OrthoFinder output from all 47 species
Msp_g34986	No alias	component *(eL40) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Nbi_g08396	No alias	component *(eL40) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pir_g02100	RUB1, ATRUB1, NEDD8	RUB ubiquitin-fold protein & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c10_25270V3.1	Pp3c10_25270	ubiquitin extension protein 1	0.02	OrthoFinder output from all 47 species
Pp3c12_5760V3.1	UBQ6, Pp3c12_5760	ubiquitin 6	0.03	OrthoFinder output from all 47 species
Pp3c4_19000V3.1	UBQ6, Pp3c4_19000	ubiquitin 6	0.01	OrthoFinder output from all 47 species
Sam_g07360	No alias	component *(eS31) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Sam_g20114	No alias	component *(eS31) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Sam_g26881	No alias	component *(eL40) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Solyc01g068045.1.1	UBQ6, Solyc01g068045	component RPS27a of SSU proteome	0.02	OrthoFinder output from all 47 species
Spa_g29603	UBQ6	component *(eS31) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Spa_g29979	No alias	component *(eL40) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Zm00001e000962_P001	Zm00001e000962	component RPL40 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Zm00001e026237_P001	UBQ6, Zm00001e026237	component RPS27a of SSU proteome	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	IEP	HCCA
MF	GO:0005096	GTPase activator activity	IEP	HCCA
CC	GO:0005787	signal peptidase complex	IEP	HCCA
CC	GO:0005875	microtubule associated complex	IEP	HCCA
BP	GO:0006465	signal peptide processing	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007051	spindle organization	IEP	HCCA
MF	GO:0008047	enzyme activator activity	IEP	HCCA
BP	GO:0016485	protein processing	IEP	HCCA
BP	GO:0022402	cell cycle process	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0051225	spindle assembly	IEP	HCCA
BP	GO:0051604	protein maturation	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
CC	GO:0070652	HAUS complex	IEP	HCCA
BP	GO:0070925	organelle assembly	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA
BP	GO:0140694	non-membrane-bounded organelle assembly	IEP	HCCA
CC	GO:1905368	peptidase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000626	Ubiquitin-like_dom	3	74
IPR002906	Ribosomal_S27a	102	139

External Links

No external refs found!

Tin_g03631 (UBQ6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation