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  5. Tin_g04129

Tin_g04129 (DND1, ATCNGC2, CNGC2)


Aliases : DND1, ATCNGC2, CNGC2

Description : temperature sensor protein *(CNGC2) & original description: none


Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g04129

Target Alias Description ECC score Gene Family Method Actions
Adi_g018666 CNGC7, ATCNGC7 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Ceric.09G023200.1 DND1, ATCNGC2,... temperature sensor protein *(CNGC2) & original... 0.03 OrthoFinder output from all 47 species
Dac_g05216 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_35449 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel (CNGC) 0.04 OrthoFinder output from all 47 species
Lfl_g16629 DND1, ATCNGC2, CNGC2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39775 DND1, ATCNGC2, CNGC2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06447 CNGC7, ATCNGC7 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Solyc12g010010.2.1 CNGC5, ATCNGC5,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
Spa_g39810 DND2, CNGC4,... cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 116 437
No external refs found!