1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g04501

Tin_g04501


Description : component *(WDR5/SWD3) of COMPASS histone trimethylation complex & original description: none


Gene families : OG0001739 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001739_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g04501

Target Alias Description ECC score Gene Family Method Actions
Ceric.10G016200.1 Ceric.10G016200 substrate adaptor *(DHU1) of CUL4-based ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
MA_62019g0010 No alias component WDR5 of COMPASS histone trimethylation complex 0.02 OrthoFinder output from all 47 species
Mp6g03170.1 No alias component WDR5 of COMPASS histone trimethylation complex 0.02 OrthoFinder output from all 47 species
Solyc02g091790.3.1 Solyc02g091790 component WDR5 of COMPASS histone trimethylation complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 225 266
IPR001680 WD40_repeat 56 94
IPR001680 WD40_repeat 98 136
IPR001680 WD40_repeat 183 221
IPR001680 WD40_repeat 15 52
IPR001680 WD40_repeat 140 178
IPR001680 WD40_repeat 271 309
No external refs found!