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  5. Tin_g04556

Tin_g04556


Description : not classified & original description: none


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g04556

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00072460 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00013p00075010 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00168910 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00278p00010750 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G44710 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
AT5G22540 No alias Plant protein of unknown function (DUF247) 0.02 OrthoFinder output from all 47 species
Ala_g09322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12311 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g02375 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g14217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08493.t1 Aspi01Gene08493 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene48412.t1 Aspi01Gene48412 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene48414.t1 Aspi01Gene48414 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55382.t1 Aspi01Gene55382 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70527.t1 Aspi01Gene70527 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72945.t1 Aspi01Gene72945 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14168 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dac_g22021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37257 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g24405 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g13323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027389001 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01033984001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_03494 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_20052 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_20970 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_28782 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os01g21670.1 LOC_Os01g21670 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os08g30520.1 LOC_Os08g30520 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g42570.1 LOC_Os08g42570 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g34090.1 LOC_Os11g34090 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g29650.1 LOC_Os12g29650 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g35601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436979g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_413488g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g23330.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g27647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g07673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17300 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29336 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g37513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g66075 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63877 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g019310.3.1 Solyc04g019310 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc05g006690.3.1 Solyc05g006690 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc07g007010.1.1 Solyc07g007010 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc09g009230.2.1 Solyc09g009230 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc10g079520.1.1 Solyc10g079520 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc10g079530.2.1 Solyc10g079530 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g06895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g24899 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g37795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014020_P001 Zm00001e014020 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e036342_P001 Zm00001e036342 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e041187_P001 Zm00001e041187 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
InterPro domains Description Start Stop
IPR004158 DUF247_pln 34 443
No external refs found!