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  5. Tin_g04580

Tin_g04580 (XBAT35)


Aliases : XBAT35

Description : E3 ubiquiTin ligase *(XBAT3) & original description: none


Gene families : OG0001126 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001126_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g04580

Target Alias Description ECC score Gene Family Method Actions
AT4G14365 XBAT34 XB3 ortholog 4 in Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Aop_g10869 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16276.t1 XBAT35, Aspi01Gene16276 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16278.t1 XBAT35, Aspi01Gene16278 E3 ubiquitin ligase *(XBAT3) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene16280.t1 XBAT35, Aspi01Gene16280 E3 ubiquitin ligase *(XBAT3) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01027825001 XBAT35 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
LOC_Os07g26490.1 XBAT35, LOC_Os07g26490 RING-HC-class E3 ligase 0.06 OrthoFinder output from all 47 species
Lfl_g39222 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431972g0010 XBAT35 Putative E3 ubiquitin-protein ligase XBAT35... 0.04 OrthoFinder output from all 47 species
Smo81884 XBAT35 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Solyc09g090160.3.1 XBAT35, Solyc09g090160 RING-HC-class E3 ligase 0.04 OrthoFinder output from all 47 species
Zm00001e033402_P002 XBAT35, Zm00001e033402 RING-HC-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004312 fatty acid synthase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
MF GO:0009922 fatty acid elongase activity IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 60 128
No external refs found!