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  5. Tin_g04626

Tin_g04626


Description : not classified & original description: none


Gene families : OG0000162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g04626
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00084p00178510 evm_27.TU.AmTr_v1... Uncharacterized protein At3g28850 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g020923 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g115156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25963 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g17288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40722.t2 Aspi01Gene40722 actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Cba_g27559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G070100.1 Ceric.02G070100 not classified & original description: pacid=50585365... 0.04 OrthoFinder output from all 47 species
Ceric.07G055600.1 Ceric.07G055600 not classified & original description: pacid=50627902... 0.01 OrthoFinder output from all 47 species
Ceric.28G002600.1 Ceric.28G002600 not classified & original description: pacid=50570165... 0.01 OrthoFinder output from all 47 species
Ceric.35G044200.1 Ceric.35G044200 not classified & original description: pacid=50582031... 0.03 OrthoFinder output from all 47 species
Dac_g28733 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g07616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14274 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g14450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12153 No alias actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01011378001 No alias Uncharacterized protein At3g28850 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g51370.1 LOC_Os02g51370 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g01807 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g09212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19476 No alias actin filament-bundling factor *(THRUMIN) & original... 0.05 OrthoFinder output from all 47 species
Len_g24173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08632 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g33613 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_122748g0010 No alias Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g07309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g40548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c5_15250V3.1 Pp3c5_15250 Glutaredoxin family protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0113.g020827 No alias not classified & original description: CDS=1-1818 0.03 OrthoFinder output from all 47 species
Sam_g36018 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g087850.1.1 Solyc02g087850 Uncharacterized protein At3g28850 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g07070 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10159 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21954 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g50389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07425 No alias acTin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
BP GO:0006528 asparagine metabolic process IEP HCCA
BP GO:0006529 asparagine biosynthetic process IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002109 Glutaredoxin 365 430
No external refs found!