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Tin_g04654


Description : substrate adaptor *(ARKP1) of SCF E3 ubiquiTin ligase complex & original description: none


Gene families : OG0000497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000497_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g04654

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00255050 evm_27.TU.AmTr_v1... F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00013p00223970 evm_27.TU.AmTr_v1... F-box/kelch-repeat protein At3g27150 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g060037 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Adi_g080527 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ala_g00344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07885 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.27G011700.1 Ceric.27G011700 substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ehy_g15525 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
GSVIVT01020023001 No alias F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os02g51350.1 LOC_Os02g51350 F-box/kelch-repeat protein At1g74510 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g17678 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Mp4g10310.1 No alias F-box/kelch-repeat protein SKIP11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g39886 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Zm00001e012830_P001 Zm00001e012830 F-box/kelch-repeat protein SKIP11 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e023895_P005 Zm00001e023895 F-box/kelch-repeat protein At1g74510 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 334 378
IPR006652 Kelch_1 282 331
No external refs found!