Description : not classified & original description: none
Gene families : OG0002427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002427_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Tin_g04658 | |
| Cluster | HCCA: Cluster_37 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G33400 | No alias | Vacuolar import/degradation, Vid27-related protein | 0.12 | OrthoFinder output from all 47 species | |
| Ala_g23497 | No alias | not classified & original description: none | 0.12 | OrthoFinder output from all 47 species | |
| Als_g12821 | No alias | not classified & original description: none | 0.15 | OrthoFinder output from all 47 species | |
| Aop_g00721 | No alias | not classified & original description: none | 0.22 | OrthoFinder output from all 47 species | |
| Aspi01Gene00286.t1 | Aspi01Gene00286 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0261.g060766 | No alias | not classified & original description: CDS=317-2245 | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.22G002700.1 | Ceric.22G002700 | not classified & original description: pacid=50615126... | 0.14 | OrthoFinder output from all 47 species | |
| Dcu_g09878 | No alias | not classified & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| GSVIVT01009497001 | No alias | Protein CYPRO4 OS=Cynara cardunculus | 0.16 | OrthoFinder output from all 47 species | |
| LOC_Os02g08190.1 | LOC_Os02g08190 | Protein CYPRO4 OS=Cynara cardunculus... | 0.11 | OrthoFinder output from all 47 species | |
| Len_g12390 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g37219 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| MA_12899g0010 | No alias | Protein CYPRO4 OS=Cynara cardunculus... | 0.12 | OrthoFinder output from all 47 species | |
| Msp_g32123 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g02206 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g19394 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Solyc04g078940.3.1 | Solyc04g078940 | Protein CYPRO4 OS=Cynara cardunculus... | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g13061 | No alias | not classified & original description: none | 0.15 | OrthoFinder output from all 47 species | |
| Zm00001e013808_P001 | Zm00001e013808 | Protein CYPRO4 OS=Cynara cardunculus... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| CC | GO:0000808 | origin recognition complex | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
| MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006265 | DNA topological change | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013863 | VID27_C | 304 | 565 |
| No external refs found! |
