Tin_g04672 (SLO1)


Aliases : SLO1

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g04672

Target Alias Description ECC score Gene Family Method Actions
Ala_g17011 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22420 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06346 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26401 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30417 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30819 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30899 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54948 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g55080 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02865 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17427 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21628 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28711 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33592 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g00281 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g04075 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18613 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g21419 EMB2744 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g78717 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G043000.1 Ceric.02G043000 not classified & original description: pacid=50585529... 0.04 OrthoFinder output from all 47 species
Ceric.06G014300.1 Ceric.06G014300 not classified & original description: pacid=50620883... 0.04 OrthoFinder output from all 47 species
Ceric.07G028700.1 Ceric.07G028700 not classified & original description: pacid=50626039... 0.04 OrthoFinder output from all 47 species
Ceric.21G004000.1 Ceric.21G004000 not classified & original description: pacid=50604228... 0.04 OrthoFinder output from all 47 species
Ceric.23G042100.1 Ceric.23G042100 not classified & original description: pacid=50611070... 0.04 OrthoFinder output from all 47 species
Ceric.25G002100.1 Ceric.25G002100 not classified & original description: pacid=50593112... 0.04 OrthoFinder output from all 47 species
Dac_g03825 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11806 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g13534 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18416 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19077 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g21976 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23537 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23801 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25258 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g26710 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g27771 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35435 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g39652 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43213 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g44606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g45699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g45747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g14779 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g17299 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g39573 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g20812 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000072001 No alias Pentatricopeptide repeat-containing protein At3g05340... 0.04 OrthoFinder output from all 47 species
GSVIVT01010647001 SLO1 Pentatricopeptide repeat-containing protein At2g22410,... 0.04 OrthoFinder output from all 47 species
GSVIVT01012174001 No alias Pentatricopeptide repeat-containing protein At2g03380,... 0.03 OrthoFinder output from all 47 species
GSVIVT01012938001 SLO1 Pentatricopeptide repeat-containing protein At2g29760,... 0.05 OrthoFinder output from all 47 species
GSVIVT01021374001 No alias Pentatricopeptide repeat-containing protein At5g46460,... 0.05 OrthoFinder output from all 47 species
GSVIVT01035837001 LPA66 Pentatricopeptide repeat-containing protein At4g21065... 0.04 OrthoFinder output from all 47 species
GSVIVT01036757001 OTP84 Pentatricopeptide repeat-containing protein At1g20230... 0.03 OrthoFinder output from all 47 species
Len_g03385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05357 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g08595 LPA66 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g12661 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18038 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18943 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g28680 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33773 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g35291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g38675 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03935 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g14089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32009 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g48694 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15421 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27837 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38399 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g41047 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g63506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018986 No alias not classified & original description: CDS=1-1941 0.03 OrthoFinder output from all 47 species
Sam_g23134 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g065250.1.1 EMB2744, Solyc11g065250 Pentatricopeptide repeat-containing protein At5g39680... 0.03 OrthoFinder output from all 47 species
Spa_g01728 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g01746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g13790 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g19938 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g20095 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22312 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g22980 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23549 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23607 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g23612 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23959 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26362 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27591 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g27679 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27926 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45297 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52644 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55591 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g56610 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g57321 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05579 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06419 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26628 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e016281_P001 LPA66, Zm00001e016281 Pentatricopeptide repeat-containing protein At3g62890... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 190 220
IPR002885 Pentatricopeptide_repeat 392 414
IPR002885 Pentatricopeptide_repeat 365 390
IPR002885 Pentatricopeptide_repeat 162 188
IPR002885 Pentatricopeptide_repeat 429 455
IPR002885 Pentatricopeptide_repeat 263 285
IPR002885 Pentatricopeptide_repeat 289 336
IPR002885 Pentatricopeptide_repeat 86 133
No external refs found!