Tin_g04699 (EMB2261)


Aliases : EMB2261

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g04699
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
Adi_g004461 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g049921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g073485 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g42176 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g01931 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g15073 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26450 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g35743 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05758 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06621 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18410 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18775 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g27208 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g11891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27293 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37090 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g37111 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01397 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g06168 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16007 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g18614 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g21418 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23672 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g26834 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g29767 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g31625 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g33090 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g37119 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67676 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g68110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68112 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene01610.t1 CRR22, Aspi01Gene01610 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16552.t1 EMB2261, Aspi01Gene16552 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16559.t1 EMB2261, Aspi01Gene16559 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28263.t1 CRR22, Aspi01Gene28263 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001067 EMB2758 not classified & original description: CDS=1-1968 0.05 OrthoFinder output from all 47 species
Azfi_s0036.g025743 No alias not classified & original description: CDS=1-2553 0.04 OrthoFinder output from all 47 species
Azfi_s0120.g046799 No alias not classified & original description: CDS=1-2385 0.05 OrthoFinder output from all 47 species
Azfi_s0171.g055669 No alias not classified & original description: CDS=1-2286 0.03 OrthoFinder output from all 47 species
Azfi_s0228.g059086 No alias not classified & original description: CDS=12-1547 0.05 OrthoFinder output from all 47 species
Azfi_s0257.g060572 No alias not classified & original description: CDS=1-2448 0.06 OrthoFinder output from all 47 species
Cba_g07323 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29455 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75109 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G127500.1 EMB2744, Ceric.01G127500 not classified & original description: pacid=50592115... 0.04 OrthoFinder output from all 47 species
Ceric.04G059000.1 Ceric.04G059000 not classified & original description: pacid=50632212... 0.04 OrthoFinder output from all 47 species
Ceric.05G054800.1 Ceric.05G054800 not classified & original description: pacid=50577632... 0.06 OrthoFinder output from all 47 species
Ceric.06G000900.1 OTP84, Ceric.06G000900 not classified & original description: pacid=50619446... 0.05 OrthoFinder output from all 47 species
Ceric.07G035900.1 Ceric.07G035900 not classified & original description: pacid=50625961... 0.05 OrthoFinder output from all 47 species
Ceric.09G084300.1 Ceric.09G084300 not classified & original description: pacid=50586761... 0.04 OrthoFinder output from all 47 species
Ceric.10G043800.1 Ceric.10G043800 not classified & original description: pacid=50613534... 0.04 OrthoFinder output from all 47 species
Ceric.10G050400.1 Ceric.10G050400 not classified & original description: pacid=50612018... 0.05 OrthoFinder output from all 47 species
Ceric.18G060200.1 Ceric.18G060200 not classified & original description: pacid=50621585... 0.06 OrthoFinder output from all 47 species
Ceric.18G079500.1 Ceric.18G079500 not classified & original description: pacid=50621579... 0.05 OrthoFinder output from all 47 species
Ceric.21G088100.1 Ceric.21G088100 not classified & original description: pacid=50603070... 0.06 OrthoFinder output from all 47 species
Ceric.23G012500.1 Ceric.23G012500 not classified & original description: pacid=50610998... 0.05 OrthoFinder output from all 47 species
Ceric.24G044900.1 CRR2, Ceric.24G044900 not classified & original description: pacid=50629668... 0.04 OrthoFinder output from all 47 species
Ceric.25G002100.1 Ceric.25G002100 not classified & original description: pacid=50593112... 0.04 OrthoFinder output from all 47 species
Ceric.28G055900.1 Ceric.28G055900 not classified & original description: pacid=50569676... 0.05 OrthoFinder output from all 47 species
Ceric.29G055100.1 Ceric.29G055100 not classified & original description: pacid=50625141... 0.05 OrthoFinder output from all 47 species
Ceric.32G042700.1 Ceric.32G042700 not classified & original description: pacid=50598057... 0.04 OrthoFinder output from all 47 species
Dac_g05153 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g09065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15109 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22189 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g25263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29379 OTP85 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g30279 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30484 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g30493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36005 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42987 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07693 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17044 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g28005 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g49996 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g06677 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g08678 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18372 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25446 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26159 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009574001 OSB1 Cell cycle.organelle machineries.DNA... 0.04 OrthoFinder output from all 47 species
GSVIVT01010898001 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.06 OrthoFinder output from all 47 species
GSVIVT01036975001 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.04 OrthoFinder output from all 47 species
Gb_06115 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_27491 OTP84 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
LOC_Os03g56400.1 LOC_Os03g56400 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
LOC_Os04g09530.1 LOC_Os04g09530 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species
LOC_Os04g35650.1 LOC_Os04g35650 Pentatricopeptide repeat-containing protein At3g26540... 0.04 OrthoFinder output from all 47 species
LOC_Os04g41120.1 LOC_Os04g41120 Pentatricopeptide repeat-containing protein At4g38010... 0.03 OrthoFinder output from all 47 species
LOC_Os05g38190.2 LOC_Os05g38190 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
LOC_Os08g25280.1 LOC_Os08g25280 Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
LOC_Os10g30760.1 LOC_Os10g30760 Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
LOC_Os10g34720.1 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os10g40920.1 LOC_Os10g40920 RNA editing factor (MEF13) 0.04 OrthoFinder output from all 47 species
Len_g03900 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g08837 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18565 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18943 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Len_g19030 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g19061 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g40999 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g47516 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g59273 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g04970 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08705 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19289 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25656 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33055 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429043g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_127785g0010 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.04 OrthoFinder output from all 47 species
MA_140208g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_3612g0010 CRR22 Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
MA_474261g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.06 OrthoFinder output from all 47 species
MA_615077g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
MA_98224g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Msp_g09797 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g37643 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g11485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15421 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g20334 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23872 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g32185 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g38771 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g09916 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13457 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57944 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g16135 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g010995 No alias not classified & original description: CDS=1-2412 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018966 No alias not classified & original description: CDS=1-2631 0.04 OrthoFinder output from all 47 species
Sam_g06304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo108652 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Smo11063 REME1 Pentatricopeptide repeat-containing protein At2g34400... 0.03 OrthoFinder output from all 47 species
Smo119202 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Smo34426 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.03 OrthoFinder output from all 47 species
Smo34484 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.05 OrthoFinder output from all 47 species
Smo399 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.05 OrthoFinder output from all 47 species
Smo74627 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Smo96499 No alias Pentatricopeptide repeat-containing protein At4g16835,... 0.03 OrthoFinder output from all 47 species
Solyc04g079410.3.1 Solyc04g079410 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
Solyc06g053850.4.1 Solyc06g053850 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Solyc06g066080.1.1 OTP85, Solyc06g066080 Pentatricopeptide repeat-containing protein At4g21065... 0.04 OrthoFinder output from all 47 species
Spa_g08093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24192 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g28927 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32545 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17737 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g22902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26745 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001007_P001 Zm00001e001007 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Zm00001e001038_P001 CRR2, Zm00001e001038 Pentatricopeptide repeat-containing protein At1g08070,... 0.05 OrthoFinder output from all 47 species
Zm00001e001918_P001 EMB2758, Zm00001e001918 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
Zm00001e019482_P001 Zm00001e019482 Pentatricopeptide repeat-containing protein At5g48910... 0.04 OrthoFinder output from all 47 species
Zm00001e023333_P001 Zm00001e023333 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e023504_P001 CRR22, Zm00001e023504 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Zm00001e027978_P001 MEF1, Zm00001e027978 RNA editing factor (MEF1) 0.02 OrthoFinder output from all 47 species
Zm00001e031660_P001 Zm00001e031660 Pentatricopeptide repeat-containing protein At4g14170... 0.04 OrthoFinder output from all 47 species
Zm00001e032242_P001 Zm00001e032242 Pentatricopeptide repeat-containing protein At1g18485... 0.03 OrthoFinder output from all 47 species
Zm00001e032485_P001 EMB2744, Zm00001e032485 Pentatricopeptide repeat-containing protein At5g39680... 0.03 OrthoFinder output from all 47 species
Zm00001e033171_P001 Zm00001e033171 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Zm00001e036301_P001 Zm00001e036301 Pentatricopeptide repeat-containing protein At4g30700... 0.02 OrthoFinder output from all 47 species
Zm00001e038850_P001 EMB2758, Zm00001e038850 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Zm00001e040418_P001 Zm00001e040418 Pentatricopeptide repeat-containing protein At3g05340... 0.03 OrthoFinder output from all 47 species
Zm00001e040920_P001 Zm00001e040920 Pentatricopeptide repeat-containing protein At3g26540... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 380 410
IPR002885 Pentatricopeptide_repeat 49 72
IPR002885 Pentatricopeptide_repeat 251 276
IPR046848 E_motif 636 678
IPR002885 Pentatricopeptide_repeat 515 562
IPR002885 Pentatricopeptide_repeat 74 123
IPR002885 Pentatricopeptide_repeat 175 223
IPR002885 Pentatricopeptide_repeat 277 323
IPR002885 Pentatricopeptide_repeat 412 459
IPR032867 DYW_dom 744 816
No external refs found!