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  5. Tin_g05519

Tin_g05519


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g05519

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00235510 OTP84,... Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Adi_g003796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g011924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035607 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036821 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058786 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g29185 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12351 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03125 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05685 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07490 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g16416 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27516 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05729 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21870 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22269 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28399 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007695 No alias not classified & original description: CDS=1-2262 0.04 OrthoFinder output from all 47 species
Azfi_s0007.g010913 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-1608 0.04 OrthoFinder output from all 47 species
Azfi_s0270.g061187 No alias not classified & original description: CDS=1-3441 0.03 OrthoFinder output from all 47 species
Cba_g03349 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G053600.1 Ceric.01G053600 not classified & original description: pacid=50592089... 0.04 OrthoFinder output from all 47 species
Ceric.07G078100.1 OTP84, Ceric.07G078100 not classified & original description: pacid=50626860... 0.03 OrthoFinder output from all 47 species
Ceric.07G081900.1 Ceric.07G081900 not classified & original description: pacid=50627936... 0.03 OrthoFinder output from all 47 species
Ceric.12G028500.1 CRR22, Ceric.12G028500 not classified & original description: pacid=50602410... 0.03 OrthoFinder output from all 47 species
Ceric.14G063100.1 Ceric.14G063100 not classified & original description: pacid=50634149... 0.03 OrthoFinder output from all 47 species
Ceric.16G016300.1 Ceric.16G016300 not classified & original description: pacid=50589149... 0.03 OrthoFinder output from all 47 species
Ceric.25G070400.1 Ceric.25G070400 not classified & original description: pacid=50594567... 0.03 OrthoFinder output from all 47 species
Ceric.27G064300.1 Ceric.27G064300 not classified & original description: pacid=50606133... 0.03 OrthoFinder output from all 47 species
Ceric.30G024700.1 Ceric.30G024700 not classified & original description: pacid=50608167... 0.03 OrthoFinder output from all 47 species
Ceric.34G057700.1 CRR2, Ceric.34G057700 not classified & original description: pacid=50623387... 0.05 OrthoFinder output from all 47 species
Ceric.34G063100.1 Ceric.34G063100 not classified & original description: pacid=50623551... 0.03 OrthoFinder output from all 47 species
Ceric.39G045800.1 VAC1, ECB2,... not classified & original description: pacid=50583112... 0.04 OrthoFinder output from all 47 species
Dac_g23630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27646 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05681 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06788 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06971 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08785 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g10089 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19140 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22351 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g36054 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38127 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15835 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20660 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29034 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010647001 SLO1 Pentatricopeptide repeat-containing protein At2g22410,... 0.03 OrthoFinder output from all 47 species
GSVIVT01015087001 CRR2 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
GSVIVT01018262001 No alias Pentatricopeptide repeat-containing protein At2g44880... 0.03 OrthoFinder output from all 47 species
GSVIVT01029347001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os06g12510.1 LOC_Os06g12510 Pentatricopeptide repeat-containing protein At5g15300... 0.03 OrthoFinder output from all 47 species
Len_g04359 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02375 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05012 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_370961g0010 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
Msp_g33498 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g42903 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06654 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28119 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18545 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41731 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11574 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13363 MEF22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57540 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03894 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13846 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18657 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g42008 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53961 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g02929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g03800 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21254 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25159 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34646 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35189 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38969 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g40724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo101245 CRR2 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Smo21427 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Solyc03g114660.1.1 Solyc03g114660 Pentatricopeptide repeat-containing protein At1g18485... 0.03 OrthoFinder output from all 47 species
Spa_g06411 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g06871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15290 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18928 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g19369 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53135 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55591 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
CC GO:0043189 H4/H2A histone acetyltransferase complex IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902562 H4 histone acetyltransferase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 226 273
IPR002885 Pentatricopeptide_repeat 124 171
IPR002885 Pentatricopeptide_repeat 300 328
IPR002885 Pentatricopeptide_repeat 200 223
IPR002885 Pentatricopeptide_repeat 98 123
IPR046848 E_motif 345 389
No external refs found!