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  5. Tin_g05654

Tin_g05654


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g05654

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00158010 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AMTR_s00587p00011650 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AT1G74600 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 OrthoFinder output from all 47 species
AT3G08820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g005661 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g007371 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17143 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06720 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11079 CRR21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15319 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30148 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16516 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33231.t1 CRR22, Aspi01Gene33231 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g013978 CRR22 not classified & original description: CDS=1-2136 0.02 OrthoFinder output from all 47 species
Azfi_s0251.g060280 No alias not classified & original description: CDS=1-3180 0.03 OrthoFinder output from all 47 species
Azfi_s0292.g063377 OTP86 not classified & original description: CDS=1-2337 0.02 OrthoFinder output from all 47 species
Cba_g06233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06497 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07735 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G078100.1 OTP84, Ceric.07G078100 not classified & original description: pacid=50626860... 0.02 OrthoFinder output from all 47 species
Ceric.07G098300.1 CRR22, Ceric.07G098300 not classified & original description: pacid=50626946... 0.02 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.02 OrthoFinder output from all 47 species
Ceric.09G069300.1 OTP86, Ceric.09G069300 not classified & original description: pacid=50588354... 0.03 OrthoFinder output from all 47 species
Ceric.29G053300.1 Ceric.29G053300 not classified & original description: pacid=50624372... 0.03 OrthoFinder output from all 47 species
Ceric.33G061000.1 OTP84, Ceric.33G061000 not classified & original description: pacid=50606666... 0.02 OrthoFinder output from all 47 species
Ceric.34G009900.1 Ceric.34G009900 not classified & original description: pacid=50623876... 0.03 OrthoFinder output from all 47 species
Dac_g30413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33215 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19440 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13146 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Len_g03808 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g04601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12162 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21008 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g37283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54667 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06151 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08590 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17711 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28800 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43134 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g30793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16678 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18087 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20201 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37890 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16554 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63257 RARE1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04648 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11012 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g23589 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33094 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53366 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54364 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61518 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13516 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo125795 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Spa_g14725 MEF21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g27589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28119 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04591 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13206 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20369 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26778 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g34663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43984 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 225 271
IPR002885 Pentatricopeptide_repeat 734 780
IPR002885 Pentatricopeptide_repeat 530 576
IPR002885 Pentatricopeptide_repeat 327 373
IPR002885 Pentatricopeptide_repeat 122 169
IPR002885 Pentatricopeptide_repeat 427 474
IPR002885 Pentatricopeptide_repeat 633 678
IPR002885 Pentatricopeptide_repeat 301 323
IPR002885 Pentatricopeptide_repeat 708 732
IPR002885 Pentatricopeptide_repeat 606 628
IPR002885 Pentatricopeptide_repeat 504 528
IPR002885 Pentatricopeptide_repeat 199 221
No external refs found!