Aliases : DOT4
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Tin_g05656 | |
| Cluster | HCCA: Cluster_71 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00138570 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00010p00113430 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g18485... | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00016p00252350 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g22690... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00066p00062930 | EMB2261,... | Pentatricopeptide repeat-containing protein At3g49170,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00084p00089150 | OTP86,... | Pentatricopeptide repeat-containing protein At3g63370,... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g003872 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g060808 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g068892 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g072273 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g085510 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g095327 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g05739 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06363 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g26965 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g37344 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g23385 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene15587.t1 | DOT4, Aspi01Gene15587 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene28051.t1 | Aspi01Gene28051 | cofactor of plastid-encoded RNA polymerase *(TAC9) &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene29787.t2 | Aspi01Gene29787 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene35487.t1 | Aspi01Gene35487 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene36735.t1 | Aspi01Gene36735 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene63483.t1 | CRR22, Aspi01Gene63483 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g007441 | No alias | not classified & original description: CDS=1-1959 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0007.g010913 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-1608 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0033.g025053 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2580 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0059.g034666 | No alias | not classified & original description: CDS=1-1770 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0093.g043166 | No alias | not classified & original description: CDS=1-1980 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0292.g063362 | No alias | not classified & original description: CDS=1-2379 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0485.g073410 | No alias | not classified & original description: CDS=1-1641 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s1395.g102559 | No alias | not classified & original description: CDS=1-912 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s1396.g102567 | No alias | not classified & original description: CDS=1-1371 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s3922.g117339 | No alias | not classified & original description: CDS=1-831 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g35114 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g45673 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g69088 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g71700 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.09G085300.1 | Ceric.09G085300 | not classified & original description: pacid=50587383... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g02368 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g35673 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07128 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g08946 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g40867 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g50973 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g07098 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g19510 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g51790.1 | LOC_Os01g51790 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g48855 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g22764 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g35930 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_3462g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g04332 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g10059 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g23872 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g30346 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g22460 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g56901 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0008.g003970 | No alias | not classified & original description: CDS=1-3009 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0036.g011714 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2064 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0047.g013488 | No alias | not classified & original description: CDS=1-3012 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0057.g014767 | OTP84 | not classified & original description: CDS=399-2006 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0072.g016959 | No alias | not classified & original description: CDS=1-1596 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0096.g019387 | REME1 | not classified & original description: CDS=1-1161 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0133.g022243 | No alias | not classified & original description: CDS=1-1908 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0147.g023175 | No alias | not classified & original description: CDS=1-2640 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0151.g023411 | REME1 | not classified & original description: CDS=1-1494 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0233.g026492 | No alias | not classified & original description: CDS=48-2072 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g16066 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g46501 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g114010.3.1 | Solyc03g114010 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g04183 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g08446 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 302 | 324 |
| IPR002885 | Pentatricopeptide_repeat | 987 | 1014 |
| IPR002885 | Pentatricopeptide_repeat | 404 | 427 |
| IPR002885 | Pentatricopeptide_repeat | 784 | 806 |
| IPR002885 | Pentatricopeptide_repeat | 605 | 651 |
| IPR002885 | Pentatricopeptide_repeat | 21 | 68 |
| IPR002885 | Pentatricopeptide_repeat | 328 | 374 |
| IPR002885 | Pentatricopeptide_repeat | 123 | 170 |
| IPR002885 | Pentatricopeptide_repeat | 808 | 855 |
| IPR002885 | Pentatricopeptide_repeat | 706 | 753 |
| IPR002885 | Pentatricopeptide_repeat | 226 | 272 |
| IPR002885 | Pentatricopeptide_repeat | 910 | 957 |
| IPR002885 | Pentatricopeptide_repeat | 430 | 476 |
| No external refs found! |
