Tin_g05657


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g05657
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT3G24000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g002777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003872 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g004477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g004499 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005549 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005609 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060792 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g067033 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g083433 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g104165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g105593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06555 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g07462 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24408 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33780 DOT4 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g06363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19136 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19869 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54909 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05074 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g05294 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09002 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g39230 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene66769.t1 CRR22, Aspi01Gene66769 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000442 No alias not classified & original description: CDS=1-3240 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009022 No alias not classified & original description: CDS=1-2334 0.04 OrthoFinder output from all 47 species
Azfi_s0036.g025743 No alias not classified & original description: CDS=1-2553 0.04 OrthoFinder output from all 47 species
Azfi_s0221.g058730 No alias not classified & original description: CDS=1-747 0.08 OrthoFinder output from all 47 species
Azfi_s0349.g066523 EMB2758 not classified & original description: CDS=141-2294 0.04 OrthoFinder output from all 47 species
Azfi_s0444.g070599 No alias not classified & original description: CDS=1-3282 0.03 OrthoFinder output from all 47 species
Cba_g16282 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000851.30 No alias Pentatricopeptide repeat-containing protein At5g61990,... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001130.28 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g05750 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05349 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g18439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28398 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g40646 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008407001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Len_g04823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04831 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g05355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18300 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19023 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g45824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_305950g0010 EMB2261 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Msp_g04483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28331 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31269 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34215 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06220 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13171 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13749 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g15845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16039 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g17377 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20608 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g21053 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25502 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g44630 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01830 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g06978 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63652 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03881 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33120 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g43104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53979 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002155 CRR22 not classified & original description: CDS=84-2588 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011483 No alias not classified & original description: CDS=1-2124 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013695 No alias not classified & original description: CDS=1-2949 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014697 OTP86 not classified & original description: CDS=1-2199 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016434 No alias not classified & original description: CDS=1-1746 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020410 No alias not classified & original description: CDS=1-2748 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0117.g021127 No alias not classified & original description: CDS=28-1563 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0124.g021578 MEF19 not classified & original description: CDS=1-1950 0.03 OrthoFinder output from all 47 species
Sam_g07814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13514 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g47343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g01489 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g01532 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g22574 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23549 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30543 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52254 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e012422_P001 OSB1, Zm00001e012422 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Zm00001e035817_P001 Zm00001e035817 Pentatricopeptide repeat-containing protein At4g32430,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 310 356
IPR002885 Pentatricopeptide_repeat 513 560
IPR002885 Pentatricopeptide_repeat 106 152
IPR002885 Pentatricopeptide_repeat 616 662
IPR002885 Pentatricopeptide_repeat 412 458
IPR002885 Pentatricopeptide_repeat 208 254
IPR002885 Pentatricopeptide_repeat 386 408
IPR002885 Pentatricopeptide_repeat 80 102
No external refs found!