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  5. Tin_g05834

Tin_g05834


Description : not classified & original description: none


Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g05834
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
Adi_g022185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115931 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g16560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14819 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19115 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03086 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0130.g049026 No alias not classified & original description: CDS=251-1009 0.03 OrthoFinder output from all 47 species
Ceric.05G062300.1 Ceric.05G062300 not classified & original description: pacid=50578128... 0.03 OrthoFinder output from all 47 species
Dac_g13809 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g23747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04385 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19786 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19804 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01011624001 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g50560.1 LOC_Os03g50560 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g50790.1 LOC_Os04g50790 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g54870.1 LOC_Os04g54870 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os11g34680.1 LOC_Os11g34680 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Lfl_g04564 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g03642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g072770.3.1 Solyc06g072770 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g04495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012039_P002 Zm00001e012039 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 8 67
No external refs found!