Tin_g06393


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g06393

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00145640 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Adi_g005647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079818 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g07887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13276 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16414 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g17235 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g17536 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31164 SLO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31765 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35750 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36524 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g17647 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55750 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08251 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28323 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.23G075300.1 Ceric.23G075300 not classified & original description: pacid=50609898... 0.03 OrthoFinder output from all 47 species
Ceric.31G026600.1 CRR22, Ceric.31G026600 not classified & original description: pacid=50574263... 0.04 OrthoFinder output from all 47 species
Dac_g35668 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39275 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06339 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08500 VAC1, ECB2, ATECB2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g08616 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g21447 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26776 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g39483 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g43978 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g05762 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g11730 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21509 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g42846 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12270 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21750 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25136 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26396 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g04775 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18787 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g38570 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06151 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06676 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g07753 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11799 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g24085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33293 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g33323 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g38033 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_100287g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
MA_10311934g0010 MEF22 Pentatricopeptide repeat-containing protein At1g15510,... 0.08 OrthoFinder output from all 47 species
MA_141034g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
MA_6527g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Msp_g10210 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g38110 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04969 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g21947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38648 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g39731 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30911 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35928 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40875 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43369 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g11784 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03216 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06358 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18809 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g22244 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32073 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g36021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63789 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g19039 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo111982 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.04 OrthoFinder output from all 47 species
Solyc02g094480.4.1 Solyc02g094480 RNA editing factor (MEF14) 0.03 OrthoFinder output from all 47 species
Solyc09g090440.1.1 LPA66, Solyc09g090440 Pentatricopeptide repeat-containing protein At5g66520... 0.06 OrthoFinder output from all 47 species
Spa_g17686 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44700 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 13 40
IPR046848 E_motif 57 103
No external refs found!