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  5. Tin_g06538

Tin_g06538 (CBL2, ATCBL2)


Aliases : CBL2, ATCBL2

Description : calcium sensor *(CBL) & original description: none


Gene families : OG0000287 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000287_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g06538
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AT5G24270 CBL4, ATSOS3, SOS3 Calcium-binding EF-hand family protein 0.03 OrthoFinder output from all 47 species
Adi_g109795 CBL3, ATCBL3 calcium sensor *(CBL) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05980 CBL9, ATCBL9 calcium sensor *(CBL) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04010 CBL2, ATCBL2 calcium sensor *(CBL) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g11643 CBL9, ATCBL9 calcium sensor *(CBL) & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g07372 CBL2, ATCBL2 calcium sensor *(CBL) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.30G033500.1 CBL9, ATCBL9,... calcium sensor *(CBL) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g09124 CBL9, ATCBL9 calcium sensor *(CBL) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03497 CBL2, ATCBL2 calcium sensor *(CBL) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g18930.1 CBL4, ATSOS3,... calcium-dependent SOS2 activator SOS3 0.03 OrthoFinder output from all 47 species
LOC_Os12g40510.1 CBL2, ATCBL2,... Calcineurin B-like protein 2 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Ore_g28074 CBL2, ATCBL2 calcium sensor *(CBL) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26023 No alias calcium sensor *(CBL) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g38095 No alias calcium sensor *(CBL) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09059 ATCBL1, CBL1, SCABP5 calcium sensor *(CBL) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 64 109
IPR002048 EF_hand_dom 122 189
No external refs found!