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  5. Tin_g06658

Tin_g06658


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g06658

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00166520 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00110050 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00252600 MEF1 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00244370 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g05340... 0.03 OrthoFinder output from all 47 species
AT1G14470 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g002735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g054888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080720 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g099166 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g32888 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g03943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16441 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g23769 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05718 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14037 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27309 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27579 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27593 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28686 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g29513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37921 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g42240 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18162 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g63229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02406.t1 Aspi01Gene02406 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27883.t1 Aspi01Gene27883 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28051.t3 Aspi01Gene28051 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38545.t1 Aspi01Gene38545 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59237.t1 Aspi01Gene59237 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66051.t1 OTP84, Aspi01Gene66051 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0049.g030697 No alias not classified & original description: CDS=1-2361 0.02 OrthoFinder output from all 47 species
Azfi_s0245.g060017 No alias not classified & original description: CDS=1-2076 0.02 OrthoFinder output from all 47 species
Azfi_s0503.g073910 No alias not classified & original description: CDS=59-2179 0.03 OrthoFinder output from all 47 species
Azfi_s1334.g101644 No alias not classified & original description: CDS=1-3543 0.02 OrthoFinder output from all 47 species
Azfi_s4317.g118724 No alias not classified & original description: CDS=1-465 0.02 OrthoFinder output from all 47 species
Cba_g04736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19882 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20164 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g35114 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.02 OrthoFinder output from all 47 species
Dac_g04642 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14692 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27114 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g30446 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40815 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g43531 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g19078 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24377 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14557 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20812 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23295 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_32185 OSB3 ssDNA-binding protein (OSB). TAC9 cofactor of... 0.03 OrthoFinder output from all 47 species
Gb_34736 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
LOC_Os01g28570.1 LOC_Os01g28570 Pentatricopeptide repeat-containing protein At3g49710... 0.02 OrthoFinder output from all 47 species
LOC_Os01g66160.1 REME1, LOC_Os01g66160 Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
Len_g01393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g34131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02262 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05475 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07374 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07844 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22099 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g32914 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g33937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_118961g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
Msp_g03167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31269 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34247 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03158 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05131 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15027 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35928 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03427 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g52500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g53095 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57530 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57986 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63818 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63870 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63890 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g64477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04516 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06477 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07615 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18657 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29710 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35387 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55456 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005517 CRR22 not classified & original description: CDS=1-2004 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017192 No alias not classified & original description: CDS=402-2123 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s1579.g028098 No alias not classified & original description: CDS=1-249 0.03 OrthoFinder output from all 47 species
Sam_g01375 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g03099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g03885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo109283 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
Spa_g06686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10134 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g12935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04591 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23111 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g41006 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g46355 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005071_P002 OSB1, Zm00001e005071 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Zm00001e013232_P001 Zm00001e013232 Pentatricopeptide repeat-containing protein At2g36730... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 238 281
IPR002885 Pentatricopeptide_repeat 537 584
IPR002885 Pentatricopeptide_repeat 338 383
IPR002885 Pentatricopeptide_repeat 137 185
IPR002885 Pentatricopeptide_repeat 436 484
IPR002885 Pentatricopeptide_repeat 410 434
IPR002885 Pentatricopeptide_repeat 511 533
IPR002885 Pentatricopeptide_repeat 210 229
No external refs found!