Tin_g07085 (AtERF48, DREB2C)

Aliases : AtERF48, DREB2C

Description : subgroup ERF-IV/DREB2 transcription factor & original description: none

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g07085
Cluster	HCCA: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00238800	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
AT1G53170	ATERF8, ATERF-8, ERF8	ethylene response factor 8	0.03	OrthoFinder output from all 47 species
Adi_g074528	ERF-1, ATERF-1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g30791	No alias	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.03	OrthoFinder output from all 47 species
Als_g48036	DEAR2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g03305	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aob_g07731	ATERF4, RAP2.5,...	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene24402.t1	DEAR2, Aspi01Gene24402	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene49926.t1	ATERF12, ERF12,...	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dac_g15023	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dac_g39506	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g31467	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g03378	ATERF8, ATERF-8, ERF8	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ehy_g10951	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
GSVIVT01004798001	ERF-1, ATERF-1	No description available	0.02	OrthoFinder output from all 47 species
GSVIVT01013917001	ERF104	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
GSVIVT01021098001	ATERF4, RAP2.5,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	OrthoFinder output from all 47 species
Gb_01212	No alias	transcription factor (DREB)	0.04	OrthoFinder output from all 47 species
Gb_26738	DREB26	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
LOC_Os05g34730.1	LOC_Os05g34730	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Len_g28544	AtERF48, DREB2C	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Lfl_g31233	RAP2.12	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
MA_179692g0020	ERF-1, ATERF-1	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
MA_2446g0010	No alias	Ethylene-responsive transcription factor ERF053...	0.03	OrthoFinder output from all 47 species
MA_4032g0010	ATERF3, ERF3	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
MA_65985g0010	ERF-1, ATERF-1	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
MA_8984558g0010	No alias	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Mp1g20040.1	ATERF4, RAP2.5,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Ore_g40725	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ppi_g09795	AtERF48, DREB2C	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Solyc01g108240.3.1	RRTF1, Solyc01g108240	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Solyc03g093560.1.1	Solyc03g093560	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Solyc05g052040.1.1	Solyc05g052040	transcription factor (ERF)	0.06	OrthoFinder output from all 47 species
Solyc08g078190.2.1	ERF5, ATERF-5,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Solyc10g006130.1.1	ATERF3, ERF3,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Spa_g16502	DEAR1, CEJ1, ATERF#011	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e015219_P001	Zm00001e015219	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Zm00001e033790_P001	Zm00001e033790	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	IEP	HCCA
BP	GO:0006887	exocytosis	IEP	HCCA
BP	GO:0006914	autophagy	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0032940	secretion by cell	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0046903	secretion	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	HCCA
BP	GO:0061919	process utilizing autophagic mechanism	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
BP	GO:0140352	export from cell	IEP	HCCA
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1902554	serine/threonine protein kinase complex	IEP	HCCA
CC	GO:1902911	protein kinase complex	IEP	HCCA
MF	GO:1902936	phosphatidylinositol bisphosphate binding	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA
CC	GO:1990316	Atg1/ULK1 kinase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	272	321

External Links

No external refs found!

Tin_g07085 (AtERF48, DREB2C)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation