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  5. Tin_g07666

Tin_g07666


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g07666

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272900 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
AT2G21090 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G39620 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G24000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G14850 LOI1, MEF11 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G16835 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G08490 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g004372 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g007107 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g023691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035455 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g036462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036486 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059315 SLO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g066608 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g067993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080993 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g099276 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g109057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g112689 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g46724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33780 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06136 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06159 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15782 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30201 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g56884 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59996 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26985 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27260 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27830 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g27894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32957 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02602 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33579 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001369 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: CDS=172-2610 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008361 CRR22 not classified & original description: CDS=1-1914 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009022 No alias not classified & original description: CDS=1-2334 0.02 OrthoFinder output from all 47 species
Azfi_s0010.g012382 OTP84 not classified & original description: CDS=1-2100 0.03 OrthoFinder output from all 47 species
Azfi_s0018.g014887 No alias not classified & original description: CDS=1-2661 0.03 OrthoFinder output from all 47 species
Azfi_s0020.g015372 OTP86 not classified & original description: CDS=1-2592 0.03 OrthoFinder output from all 47 species
Azfi_s0021.g015711 No alias not classified & original description: CDS=1-3111 0.03 OrthoFinder output from all 47 species
Azfi_s0062.g035255 No alias not classified & original description: CDS=1-1599 0.03 OrthoFinder output from all 47 species
Azfi_s0095.g043642 No alias not classified & original description: CDS=144-2255 0.03 OrthoFinder output from all 47 species
Azfi_s0134.g049386 No alias not classified & original description: CDS=1-2409 0.03 OrthoFinder output from all 47 species
Azfi_s0164.g054282 No alias not classified & original description: CDS=1-4443 0.03 OrthoFinder output from all 47 species
Azfi_s0312.g064188 No alias not classified & original description: CDS=1-2817 0.03 OrthoFinder output from all 47 species
Cba_g02684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20506 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g21995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g36311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G053600.1 Ceric.01G053600 not classified & original description: pacid=50592089... 0.04 OrthoFinder output from all 47 species
Ceric.02G033100.1 Ceric.02G033100 not classified & original description: pacid=50586102... 0.03 OrthoFinder output from all 47 species
Ceric.03G043000.1 Ceric.03G043000 not classified & original description: pacid=50572819... 0.04 OrthoFinder output from all 47 species
Ceric.04G078900.1 Ceric.04G078900 not classified & original description: pacid=50631863... 0.03 OrthoFinder output from all 47 species
Ceric.05G054800.1 Ceric.05G054800 not classified & original description: pacid=50577632... 0.03 OrthoFinder output from all 47 species
Ceric.07G091600.1 Ceric.07G091600 not classified & original description: pacid=50627346... 0.03 OrthoFinder output from all 47 species
Ceric.09G084300.1 Ceric.09G084300 not classified & original description: pacid=50586761... 0.04 OrthoFinder output from all 47 species
Ceric.13G076400.1 Ceric.13G076400 not classified & original description: pacid=50635248... 0.03 OrthoFinder output from all 47 species
Ceric.15G077000.1 EMB2261, Ceric.15G077000 not classified & original description: pacid=50639459... 0.03 OrthoFinder output from all 47 species
Ceric.1Z148300.1 Ceric.1Z148300 not classified & original description: pacid=50637132... 0.04 OrthoFinder output from all 47 species
Ceric.21G062600.1 Ceric.21G062600 not classified & original description: pacid=50603664... 0.03 OrthoFinder output from all 47 species
Ceric.22G079200.1 OTP84, Ceric.22G079200 not classified & original description: pacid=50615391... 0.04 OrthoFinder output from all 47 species
Ceric.24G026700.1 Ceric.24G026700 not classified & original description: pacid=50628649... 0.06 OrthoFinder output from all 47 species
Ceric.30G037100.1 Ceric.30G037100 not classified & original description: pacid=50608918... 0.04 OrthoFinder output from all 47 species
Ceric.38G024200.1 Ceric.38G024200 not classified & original description: pacid=50580039... 0.03 OrthoFinder output from all 47 species
Ceric.38G046100.1 Ceric.38G046100 not classified & original description: pacid=50579564... 0.03 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.01 OrthoFinder output from all 47 species
Dac_g04194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g06901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19016 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22254 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28844 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g31027 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16902 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037258001 No alias Pentatricopeptide repeat-containing protein At5g27110... 0.03 OrthoFinder output from all 47 species
LOC_Os01g68490.1 MEF21, LOC_Os01g68490 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os07g39090.1 LOC_Os07g39090 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Len_g03892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06637 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g25864 OSB4 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
MA_55967g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_956160g0010 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.02 OrthoFinder output from all 47 species
Msp_g09823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12146 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20280 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g20568 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23144 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g25431 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31404 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34233 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41402 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g44674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45693 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01159 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43227 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01677 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03426 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04351 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g05957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06978 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11385 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g15855 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g51106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63652 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g66518 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002787 No alias not classified & original description: CDS=1-2232 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002944 No alias not classified & original description: CDS=1-2634 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004955 No alias not classified & original description: CDS=1-2634 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008151 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010465 No alias not classified & original description: CDS=1-2262 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011031 No alias not classified & original description: CDS=1-2574 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020712 EMB2758 not classified & original description: CDS=1-2046 0.02 OrthoFinder output from all 47 species
Sam_g07455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13666 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19797 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g26655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27517 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g29816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30171 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40435 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo109721 No alias Pentatricopeptide repeat-containing protein At3g63370,... 0.02 OrthoFinder output from all 47 species
Smo45004 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Solyc04g051480.1.1 OTP84, Solyc04g051480 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Spa_g02212 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12442 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55591 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028330_P001 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 734 781
IPR002885 Pentatricopeptide_repeat 839 882
IPR002885 Pentatricopeptide_repeat 431 477
IPR002885 Pentatricopeptide_repeat 632 680
IPR002885 Pentatricopeptide_repeat 531 579
IPR002885 Pentatricopeptide_repeat 329 377
IPR002885 Pentatricopeptide_repeat 131 158
IPR002885 Pentatricopeptide_repeat 607 631
IPR032867 DYW_dom 1061 1129
No external refs found!