Tin_g07954


Description : not classified & original description: none


Gene families : OG0000738 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000738_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g07954
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT2G46250 No alias myosin heavy chain-related 0.02 OrthoFinder output from all 47 species
AT3G11590 No alias unknown protein; LOCATED IN: plasma membrane; EXPRESSED... 0.02 OrthoFinder output from all 47 species
AT5G41620 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 OrthoFinder output from all 47 species
Adi_g080767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39227 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene10833.t1 Aspi01Gene10833 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037646001 No alias Uncharacterized protein At5g41620 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_10769 No alias Uncharacterized protein At5g41620 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os04g31400.1 LOC_Os04g31400 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Nbi_g04388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41596 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003714 No alias not classified & original description: CDS=1-960 0.03 OrthoFinder output from all 47 species
Solyc06g074190.3.1 Solyc06g074190 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc08g081830.3.1 Solyc08g081830 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc10g083190.3.1 Solyc10g083190 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc12g005010.2.1 Solyc12g005010 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g00750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024800_P004 Zm00001e024800 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e030712_P001 Zm00001e030712 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e039960_P001 Zm00001e039960 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!