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  5. Tin_g08470

Tin_g08470


Description : not classified & original description: none


Gene families : OG0001929 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001929_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g08470
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00166070 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AT1G67040 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.06 OrthoFinder output from all 47 species
AT3G58650 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.1 OrthoFinder output from all 47 species
Als_g15456 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57945.t1 Aspi01Gene57945 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g01335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G066100.1 Ceric.06G066100 not classified & original description: pacid=50619532... 0.1 OrthoFinder output from all 47 species
Ceric.17G018400.1 Ceric.17G018400 not classified & original description: pacid=50618175... 0.08 OrthoFinder output from all 47 species
Ceric.24G058500.1 Ceric.24G058500 not classified & original description: pacid=50628935... 0.09 OrthoFinder output from all 47 species
GSVIVT01031010001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01035042001 No alias No description available 0.12 OrthoFinder output from all 47 species
LOC_Os03g19080.3 LOC_Os03g19080 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os03g61620.1 LOC_Os03g61620 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g40624 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g03463 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434911g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003194 No alias not classified & original description: CDS=1-3084 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g007008 No alias not classified & original description: CDS=144-3170 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0082.g018085 No alias not classified & original description: CDS=53-2638 0.03 OrthoFinder output from all 47 species
Smo443543 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g060410.4.1 Solyc01g060410 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g41418 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e001394_P001 Zm00001e001394 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e006276_P001 Zm00001e006276 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e038358_P001 Zm00001e038358 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR025486 DUF4378 881 1059
IPR032795 DUF3741-assoc 102 126
No external refs found!