Tin_g08646

Description : pecTin methylesterase & original description: none

Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g08646
Cluster	HCCA: Cluster_13

Target	Alias	Description	ECC score	Gene Family Method
Als_g07065	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.14G062500.1	Ceric.14G062500	pectin methylesterase & original description:...	0.05	OrthoFinder output from all 47 species
Dac_g15161	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
MA_6149868g0010	No alias	pectin methylesterase	0.04	OrthoFinder output from all 47 species
Ore_g26499	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g20339	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c12_24000V3.1	Pp3c12_24000	Pectin lyase-like superfamily protein	0.02	OrthoFinder output from all 47 species
Spa_g09186	No alias	pectin methylesterase & original description: none	0.05	OrthoFinder output from all 47 species
Zm00001e035522_P001	QRT1, Zm00001e035522	pectin methylesterase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005215	transporter activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:0140359	ABC-type transporter activity	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	95	391

External Links

No external refs found!