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  5. Tin_g08719

Tin_g08719 (MBD05, MBD5, ATMBD5)


Aliases : MBD05, MBD5, ATMBD5

Description : methylation reader *(MBD5-6) & original description: none


Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g08719

Target Alias Description ECC score Gene Family Method Actions
Adi_g019651 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g13387 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06285 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g14173 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g15860 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.06 OrthoFinder output from all 47 species
Solyc03g025970.3.1 MBD13, Solyc03g025970 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 406 455
No external refs found!