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  5. Tin_g09722

Tin_g09722


Description : not classified & original description: none


Gene families : OG0003957 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003957_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g09722
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00130p00027180 evm_27.TU.AmTr_v1... Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT2G42750 No alias DNAJ heat shock N-terminal domain-containing protein 0.04 OrthoFinder output from all 47 species
Adi_g026027 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g05402 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g06639 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g02974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01256 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s2756.g112948 No alias not classified & original description: CDS=218-898 0.03 OrthoFinder output from all 47 species
Ceric.18G070000.1 Ceric.18G070000 not classified & original description: pacid=50621590... 0.07 OrthoFinder output from all 47 species
Cre01.g009900 No alias Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g21558 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g03038 No alias RNA chaperone component *(U11/U12-31K) of U11/U12 snRNP... 0.06 OrthoFinder output from all 47 species
Dde_g17732 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g05642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17377 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01020748001 No alias Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_36817 No alias Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Gb_36818 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g53020.1 LOC_Os01g53020 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g10921 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g01647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_213630g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_8214778g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9152890g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g06753 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g47418 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Nbi_g13780 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g33055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20402 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pnu_g07196 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g00796 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ppi_g15245 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc07g055260.3.1 Solyc07g055260 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Spa_g05014 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e028229_P001 Zm00001e028229 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e032179_P001 Zm00001e032179 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 87 149
No external refs found!