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  5. Tin_g09850

Tin_g09850


Description : subfamily ABCG transporter & original description: none


Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g09850
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00258490 ABCG14,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00134p00069640 ABCG25,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AT1G31770 ABCG14 ATP-binding cassette 14 0.03 OrthoFinder output from all 47 species
Ala_g02542 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16669 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27548 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50767 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07219 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00019.t1 Aspi01Gene00019 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36520.t1 Aspi01Gene36520 subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0073.g037209 No alias subfamily ABCG transporter & original description: CDS=211-2310 0.03 OrthoFinder output from all 47 species
Cba_g06567 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G008600.1 Ceric.13G008600 subfamily ABCG transporter & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.17G037500.1 Ceric.17G037500 subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.30G014400.1 Ceric.30G014400 subfamily ABCG transporter & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g07574 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16939 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10865 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01674 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22600 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014402001 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01034463001 ABCG25, ATABCG25 Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Lfl_g30819 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g31749 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g19930.1 ABCG26, WBC27 ABC transporter G family member 26 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g14978 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31647 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25470 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15519 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g06753 No alias sporopollenin precursor exporter *(ABCG26) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g03210 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29010 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015589 No alias not classified & original description: CDS=22-1557 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020718 No alias not classified & original description: CDS=536-1729 0.02 OrthoFinder output from all 47 species
Sam_g14611 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g070970.4.1 Solyc04g070970 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Solyc08g005580.3.1 ABCG14, Solyc08g005580 cytokinin transporter (ABCG14). subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e040163_P001 ABCG14, Zm00001e040163 cytokinin transporter (ABCG14). subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 211 363
IPR013525 ABC_2_trans 540 742
No external refs found!