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  5. Tin_g09948

Tin_g09948


Description : not classified & original description: none


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g09948

Target Alias Description ECC score Gene Family Method Actions
Ala_g35611 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g00572 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g10057 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g38527 RD2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17854 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g37343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37226.t1 Aspi01Gene37226 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene37518.t1 Aspi01Gene37518 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49546.t1 Aspi01Gene49546 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025211 No alias not classified & original description: CDS=249-644 0.04 OrthoFinder output from all 47 species
Cre16.g649650 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g22195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g00336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023785001 RD2 No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01031228001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_20328 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_33366 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g47650.1 RD2, LOC_Os02g47650 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10436989g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_114091g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_18127g0010 RD2 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_34981g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_93977g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp7g10800.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g20177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09985 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g109710.3.1 RD2, Solyc01g109710 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g009050.3.1 Solyc06g009050 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g00638 ATPHOS34, PHOS34 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38853 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e018234_P001 Zm00001e018234 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e035202_P002 Zm00001e035202 Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 4 155
No external refs found!