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  5. Tin_g10280

Tin_g10280 (BGAL1)


Aliases : BGAL1

Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000377_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g10280
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT2G32810 BGAL9 beta galactosidase 9 0.02 OrthoFinder output from all 47 species
Ala_g27976 BGAL1 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20083 BGAL1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19108 BGAL3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27601 BGAL8 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene16024.t1 BGAL1, Aspi01Gene16024 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68254.t1 BGAL1, Aspi01Gene68254 EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Azfi_s0074.g037404 BGAL1 EC_3.2 glycosylase & original description: CDS=1-2826 0.03 OrthoFinder output from all 47 species
GSVIVT01006709001 BGAL8 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01008835001 BGAL16 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01015038001 BGAL7 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01021068001 BGAL10 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01024221001 BGAL3 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
Gb_41532 BGAL10 1,2-beta-galactosidase. beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
LOC_Os02g12730.1 BGAL1, LOC_Os02g12730 beta-galactosidase (BGAL) 0.04 OrthoFinder output from all 47 species
LOC_Os03g06940.1 BGAL3, LOC_Os03g06940 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
Lfl_g17313 BGAL1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
MA_11388g0010 BGAL1 Beta-galactosidase 3 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
MA_87238g0010 BGAL8 beta-galactosidase (BGAL) 0.02 OrthoFinder output from all 47 species
Msp_g24966 BGAL1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04951 BGAL1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35159 BGAL8 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018931 BGAL8 EC_3.2 glycosylase & original description: CDS=111-2597 0.03 OrthoFinder output from all 47 species
Sam_g26543 No alias EC_3.2 glycosylase & original description: none 0.09 OrthoFinder output from all 47 species
Solyc02g078950.4.1 BGAL8, Solyc02g078950 beta-galactosidase (BGAL) 0.02 OrthoFinder output from all 47 species
Solyc11g018500.3.1 BGAL16, Solyc11g018500 beta-galactosidase (BGAL) 0.02 OrthoFinder output from all 47 species
Zm00001e020528_P001 BGAL1, Zm00001e020528 beta-galactosidase (BGAL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR041392 GHD 360 422
IPR000922 Lectin_gal-bd_dom 766 843
IPR031330 Gly_Hdrlase_35_cat 40 343
No external refs found!