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  5. Tin_g10568

Tin_g10568 (BBM)


Aliases : BBM

Description : AP2-type transcription factor *(WRI/AIL) & original description: none


Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g10568

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00086450 ADAP,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00225230 AIL5, EMK, CHO1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT2G28550 RAP2.7, TOE1 related to AP2.7 0.03 OrthoFinder output from all 47 species
AT3G20840 PLT1 Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G36920 AP2, FLO2, FL1 Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G17430 BBM Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g014885 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Adi_g058146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09099 RAP2.7, TOE1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g36629 BBM AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Ala_g28572 BBM not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14196 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Als_g15824 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Als_g33012 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Aop_g06262 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Aop_g40928 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene08424.t1 WRI1, ATWRI1,... AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene20942.t2 AP2, FLO2, FL1,... AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene21780.t1 BBM, Aspi01Gene21780 AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0059.g034553 AIL5, EMK, CHO1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0072.g037000 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Cba_g13334 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.03G054600.1 ADAP, Ceric.03G054600 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.32G008600.1 BBM, Ceric.32G008600 AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Cre08.g385350 HRE1 No description available 0.02 OrthoFinder output from all 47 species
Dac_g16965 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Dac_g36557 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g06469 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Dde_g30317 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g05990 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g31994 BBM AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01016352001 RAP2.7, TOE1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01016764001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
GSVIVT01025307001 PLT2 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Gb_18560 BBM transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Gb_24420 AIL5, EMK, CHO1 transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Gb_29561 No alias transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
LOC_Os01g59780.1 WRI1, ATWRI1,... transcription factor (AP2) 0.06 OrthoFinder output from all 47 species
LOC_Os01g67410.1 PLT1, LOC_Os01g67410 transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
LOC_Os02g40070.1 PLT2, LOC_Os02g40070 transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
LOC_Os03g07940.1 LOC_Os03g07940 transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
LOC_Os03g12950.1 DRG, CKC, CKC1,... no description available(sp|q84z02|crl5_orysj : 102.0) 0.03 OrthoFinder output from all 47 species
LOC_Os03g56050.1 DRG, CKC, CKC1,... transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
LOC_Os06g44750.1 AIL5, EMK, CHO1,... transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
LOC_Os07g13170.2 RAP2.7, TOE1,... transcription factor (AP2) 0.04 OrthoFinder output from all 47 species
LOC_Os11g19060.1 BBM, LOC_Os11g19060 transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Len_g46832 ADAP AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g17116 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
MA_10434312g0010 TOE3 transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
MA_113625g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_196219g0010 AIL5, EMK, CHO1 transcription factor (AP2) 0.05 OrthoFinder output from all 47 species
MA_30905g0010 WRI1, ATWRI1, ASML1, WRI transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
MA_75070g0010 AP2, FLO2, FL1 transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
MA_86195g0010 PLT2 transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
MA_98095g0010 No alias transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Mp7g13270.1 ADAP transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Mp8g11450.1 No alias transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Msp_g32091 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g09452 BBM AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g11348 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g17459 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ore_g26951 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Pir_g17715 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Pir_g41422 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g21617 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Pp3c22_17870V3.1 Pp3c22_17870 target of early activation tagged (EAT) 2 0.02 OrthoFinder output from all 47 species
Ppi_g59880 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009098 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Solyc03g044300.3.1 AP2, FLO2, FL1,... transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Solyc06g075510.4.1 RAP2.7, TOE1,... transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Solyc11g008560.2.1 BBM, Solyc11g008560 transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Solyc11g010710.2.1 PLT3, AIL6,... transcription factor (AP2) 0.04 OrthoFinder output from all 47 species
Solyc11g061750.2.1 PLT2, Solyc11g061750 transcription factor (AP2) 0.04 OrthoFinder output from all 47 species
Zm00001e005817_P003 DRG, CKC, CKC1,... transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Zm00001e015104_P001 PLT2, Zm00001e015104 transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Zm00001e018951_P001 PLT2, Zm00001e018951 transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Zm00001e019489_P001 WRI1, ATWRI1,... transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Zm00001e027593_P003 AP2, FLO2, FL1,... transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Zm00001e037696_P002 PLT2, Zm00001e037696 transcription factor (AP2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045926 negative regulation of growth IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 346 404
IPR001471 AP2/ERF_dom 448 498
No external refs found!