Tin_g11043 (RAP2.2)

Aliases : RAP2.2

Description : transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity & original description: none

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g11043

Target	Alias	Description	ECC score	Gene Family Method
Als_g25437	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aob_g26090	RAP2.11	transcription factor *(ERN1) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene53875.t1	DEAR4, RAP2.10,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ceric.01G088400.1	Ceric.01G088400	subgroup ERF-V transcription factor & original...	0.02	OrthoFinder output from all 47 species
Cre16.g649433	RAP2.2	No description available	0.01	OrthoFinder output from all 47 species
Dde_g06699	Rap2.6L	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g12089	RAP2.12	not classified & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os01g21120.1	HRE2, LOC_Os01g21120	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Msp_g06492	DREB26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g09626	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Nbi_g12944	ERF72, EBP, ATEBP, RAP2.3	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Nbi_g19264	No alias	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pnu_g10528	CRF4	subgroup ERF-VI transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g00872	RAP2.2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Sam_g25987	No alias	subgroup ERF-IV/DREB2 transcription factor & original...	0.02	OrthoFinder output from all 47 species
Spa_g52658	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Spa_g54949	TINY2	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	99	147

External Links

No external refs found!

Tin_g11043 (RAP2.2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation