1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g11244

Tin_g11244 (ABCB19, ATABCB19,...)


Aliases : ABCB19, ATABCB19, MDR1, MDR11, ATPGP19, ATMDR1, ATMDR11, PGP19

Description : subfamily ABCB transporter & original description: none


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g11244
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00109790 PGP11,... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00045p00109940 PGP11,... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
AT2G36910 PGP1, ABCB1, ATPGP1 ATP binding cassette subfamily B1 0.03 OrthoFinder output from all 47 species
AT2G47000 ATPGP4, PGP4, ABCB4, MDR4 ATP binding cassette subfamily B4 0.04 OrthoFinder output from all 47 species
AT3G28345 No alias ABC transporter family protein 0.03 OrthoFinder output from all 47 species
AT3G28360 PGP16 P-glycoprotein 16 0.05 OrthoFinder output from all 47 species
AT3G62150 PGP21 P-glycoprotein 21 0.06 OrthoFinder output from all 47 species
AT4G01820 PGP3, MDR3 P-glycoprotein 3 0.03 OrthoFinder output from all 47 species
AT4G18050 PGP9 P-glycoprotein 9 0.02 OrthoFinder output from all 47 species
AT4G25960 PGP2 P-glycoprotein 2 0.05 OrthoFinder output from all 47 species
AT5G46540 PGP7 P-glycoprotein 7 0.03 OrthoFinder output from all 47 species
Ala_g17861 ABCB19,... not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g26174 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27372 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g29011 PGP10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38133 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68609 PGP13 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08453.t1 PGP11, Aspi01Gene08453 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42791.t1 PGP21, Aspi01Gene42791 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0039.g026389 PGP11 subfamily ABCB transporter & original description: CDS=323-4378 0.03 OrthoFinder output from all 47 species
Cba_g75977 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G084300.1 ABCB19,... subfamily ABCB transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.34G053700.1 PGP2, Ceric.34G053700 subfamily ABCB transporter & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.38G058800.1 PGP2, Ceric.38G058800 subfamily ABCB transporter & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g23401 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35376 PGP21 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dac_g35671 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39907 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g41330 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45466 PGP11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g44934 PGP11 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46023 PGP13 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013125001 PGP2 Solute transport.primary active transport.ABC... 0.06 OrthoFinder output from all 47 species
GSVIVT01021365001 PGP9 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01028256001 PGP11 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Gb_10211 No alias subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Gb_13908 PGP10 ABC transporter B family member 10 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Gb_36497 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Gb_36503 No alias serine carboxypeptidase. subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
LOC_Os01g18670.1 PGP21, LOC_Os01g18670 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
LOC_Os01g50070.1 LOC_Os01g50070 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g47500.1 PGP9, LOC_Os05g47500 subfamily ABCB transporter 0.06 OrthoFinder output from all 47 species
Lfl_g33330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_100742g0020 PGP16 ABC transporter B family member 16 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
MA_10134765g0010 PGP11 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10432922g0010 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
MA_10436810g0010 No alias Putative multidrug resistance protein OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
MA_126766g0010 PGP2 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_18863g0020 PGP3, MDR3 ABC transporter B family member 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_3448627g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_79399g0010 No alias Putative multidrug resistance protein OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_934204g0010 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_9415070g0020 No alias subfamily ABCB transporter 0.06 OrthoFinder output from all 47 species
Mp2g02910.1 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Mp2g11920.1 ABCB19,... subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Msp_g32270 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g34237 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g36979 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19754 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28855 PGP10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29607 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42899 No alias subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g56055 PGP21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57324 ATPGP4, PGP4, ABCB4, MDR4 subfamily ABCB transporter & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g60074 PGP11 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g65756 PGP11 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c1_7210V3.1 ABCB19,... ATP binding cassette subfamily B19 0.01 OrthoFinder output from all 47 species
Ppi_g03992 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17867 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g51926 ATPGP4, PGP4, ABCB4, MDR4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006153 PGP11 subfamily ABCB transporter & original description: CDS=261-4235 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006646 PGP20 subfamily ABCB transporter & original description: CDS=24-3872 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017899 PGP11 subfamily ABCB transporter & original description: CDS=362-4450 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019197 No alias subfamily ABCB transporter & original description: CDS=1-2220 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0141.g022750 PGP11 subfamily ABCB transporter & original description: CDS=1-3756 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022862 No alias not classified & original description: CDS=281-511 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0478.g027423 PGP11 subfamily ABCB transporter & original description: CDS=139-3981 0.07 OrthoFinder output from all 47 species
Sam_g34538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo99885 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Solyc03g005860.4.1 PGP11, Solyc03g005860 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Solyc03g093650.3.1 Solyc03g093650 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Solyc03g122070.3.1 ABCB19,... subfamily ABCB transporter 0.06 OrthoFinder output from all 47 species
Solyc06g009280.1.1 PGP11, Solyc06g009280 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Solyc11g067300.2.1 PGP11, Solyc11g067300 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Solyc12g098840.3.1 PGP11, Solyc12g098840 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Spa_g06203 PGP13 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39329 No alias subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g40340 ABCB19,... subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g06701 ABCB19,... subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g31718 PGP2 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g46427 ATPGP4, PGP4, ABCB4, MDR4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019933_P001 Zm00001e019933 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Zm00001e020073_P001 ATPGP4, PGP4,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Zm00001e023274_P001 PGP2, Zm00001e023274 subfamily ABCB transporter 0.07 OrthoFinder output from all 47 species
Zm00001e025063_P001 Zm00001e025063 subfamily ABCB transporter 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 345 493
IPR011527 ABC1_TM_dom 664 928
IPR011527 ABC1_TM_dom 19 273
IPR003439 ABC_transporter-like_ATP-bd 1002 1150
No external refs found!