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  5. Tin_g12365

Tin_g12365


Description : not classified & original description: none


Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g12365
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene12193.t1 Aspi01Gene12193 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g20923 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_12376 MBD05, MBD5, ATMBD5 methylation reader (MBD5-6) 0.03 OrthoFinder output from all 47 species
Mp2g13260.1 MBD05, MBD5, ATMBD5 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g17409 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09473 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 236 291
No external refs found!