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  5. Tin_g12671

Tin_g12671 (ATHPCAT2, HAC1, ATHAC1, PCAT2)


Aliases : ATHPCAT2, HAC1, ATHAC1, PCAT2

Description : component *(KIX) of PPD-KIX transcriptional repressor complex & original description: none


Gene families : OG0000672 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000672_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g12671
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00078710 ATHPCAT2, HAC1,... RNA biosynthesis.transcriptional activation.TAZ histone... 0.03 OrthoFinder output from all 47 species
Ala_g11411 HAC12 histone acetyltransferase *(HAC/HPCAT) & original... 0.02 OrthoFinder output from all 47 species
Ala_g17668 ATHPCAT2, HAC1,... component *(KIX) of PPD-KIX transcriptional repressor... 0.05 OrthoFinder output from all 47 species
Ala_g22443 ATHPCAT2, HAC1,... histone acetyltransferase *(HAC/HPCAT) & original... 0.04 OrthoFinder output from all 47 species
Als_g19313 ATHPCAT2, HAC1,... component *(KIX) of PPD-KIX transcriptional repressor... 0.03 OrthoFinder output from all 47 species
Aop_g21609 HAC12 histone acetyltransferase *(HAC/HPCAT) & original... 0.03 OrthoFinder output from all 47 species
Cba_g67739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06528 ATHPCAT2, HAC1,... component *(KIX) of PPD-KIX transcriptional repressor... 0.04 OrthoFinder output from all 47 species
MA_9910264g0010 ATHPCAT2, HAC1,... histone acetyltransferase (HAC/HPCAT) 0.03 OrthoFinder output from all 47 species
Pir_g64741 ATHPCAT2, HAC1,... component *(KIX) of PPD-KIX transcriptional repressor... 0.03 OrthoFinder output from all 47 species
Ppi_g08773 ATHPCAT2, HAC1,... component *(KIX) of PPD-KIX transcriptional repressor... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 916 957
IPR013178 Histone_AcTrfase_Rtt109/CBP 1016 1229
IPR000197 Znf_TAZ 540 609
IPR000197 Znf_TAZ 1482 1553
IPR000433 Znf_ZZ 1415 1455
IPR000433 Znf_ZZ 1292 1327
No external refs found!